RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SDHBP21912 280 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 ABL2P42684 1182 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 SLC1A1P43005 524 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 PAFAH1B3Q15102 231 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 ZFYVE27Q5T4F4 411 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 GDPD4Q6W3E5 623 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 TRIM69Q86WT6 500 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 MINDY1Q8N5J2 469 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 KLK6Q92876 244 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 PREBQ9HCU5 417 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 GGT7Q9UJ14 662 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 ZFR2Q9UPR6 939 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 FADS3Q9Y5Q0 445 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 ALG6Q9Y672 507 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 CACNA1EQ15878 2313 aa18.54■□□□□ 0.56
SNRPA1-203ENST00000540017 A0A1W2PQU0 124 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 TTC24A2A3L6 582 aaPredicted RBP18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 LRRD1A4D1F6 860 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 SYPP08247 313 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 TNNT1P13805 278 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 SERPINB6P35237 376 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 AFF3P51826 1226 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 SLC10A2Q12908 348 aaPredicted RBP18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 RFTN1Q14699 578 aaPredicted RBP18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 LBRQ14739 615 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 LRRC73Q5JTD7 316 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 TMCO4Q5TGY1 634 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 LRRC38Q5VT99 294 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 FBXL19Q6PCT2 694 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 MAP7D3Q8IWC1 876 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 PGBD5Q8N414 524 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 LRRN4Q8WUT4 740 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 ZNF599Q96NL3 588 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 RNF157Q96PX1 679 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 CINPQ9BW66 212 aaPredicted RBP18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 OSBPL1AQ9BXW6 950 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 CPEB1Q9BZB8 566 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 LACRTQ9GZZ8 138 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 ITM2BQ9Y287 266 aa18.53■□□□□ 0.56
SNRPA1-203ENST00000540017 A0A0U1RQJ8 604 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 SPOPO43791 374 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 PCDH8O95206 1070 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 ITIH2P19823 946 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 GRIA4P48058 902 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 CSNK1DP48730 415 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 RACK1P63244 317 aaKnown RBP18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 GBE1Q04446 702 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 RAD51Q06609 339 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 CCDC15Q0P6D6 951 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 KIF19Q2TAC6 998 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 ZNF284Q2VY69 593 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 UAP1L1Q3KQV9 507 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 SEL1L3Q68CR1 1132 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 SRLQ86TD4 932 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 HORMAD1Q86X24 394 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 RHOT1Q8IXI2 618 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 ATPAF2Q8N5M1 289 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 RNF25Q96BH1 459 aaPredicted RBP18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 SERAC1Q96JX3 654 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 PSKH2Q96QS6 385 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 IL21RQ9HBE5 538 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 LUC7LQ9NQ29 371 aaKnown RBP18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 CA5BQ9Y2D0 317 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 ANKRD6Q9Y2G4 727 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 SNX11Q9Y5W9 270 aa18.52■□□□□ 0.56
SNRPA1-203ENST00000540017 A0A1W2PR77 199 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 AP1G1O43747 822 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 KRT1P04264 644 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 TIMP2P16035 220 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 PRLRP16471 622 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 GARSP41250 739 aaKnown RBP18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 ATXN3P54252 364 aaPredicted RBP18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 NSUN2Q08J23 767 aaKnown RBP eCLIP18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 GALNT2Q10471 571 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 FGL2Q14314 439 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 TMEM259Q4ZIN3 620 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 NEK5Q6P3R8 708 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 PRPF39Q86UA1 669 aaKnown RBP18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 ZSWIM9Q86XI8 627 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 CAMK1DQ8IU85 385 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 PLD5Q8N7P1 536 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 TPCN2Q8NHX9 752 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 AASDHPPTQ9NRN7 309 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 DKK3Q9UBP4 350 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 SEPT3Q9UH03 358 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 SHROOM3Q8TF72 1996 aa18.51■□□□□ 0.55
SNRPA1-203ENST00000540017 ZNF487B1APH4 448 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 KCNK3O14649 394 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 AREL1O15033 823 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 SLC31A1O15431 190 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 PJA2O43164 708 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 MARCKSL1P49006 195 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 VAV2P52735 878 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 TEAD4Q15561 434 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 HLA-BQ31612 363 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 NAPEPLDQ6IQ20 393 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 C11orf63Q6NUN7 778 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 MFSD7Q6UXD7 560 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 DGLUCYQ7Z3D6 616 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 TTC7BQ86TV6 843 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms