RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 J3KR12 359 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 MYO1FO00160 1098 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 VILLO15195 856 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 PRAMEF11O60813 436 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 RNGTTO60942 597 aaKnown RBP13.24□□□□□ -0.29
CNOT1-220ENST00000569916 ZNF883P0CG24 379 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 CEACAM1P13688 526 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 ADRB3P13945 408 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 MAT2AP31153 395 aaKnown RBP13.24□□□□□ -0.29
CNOT1-220ENST00000569916 CTSKP43235 329 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 PAPOLAP51003 745 aaKnown RBP13.24□□□□□ -0.29
CNOT1-220ENST00000569916 RHOAP61586 193 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 CCDC15Q0P6D6 951 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 SLC14A1Q13336 389 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 BOLA3Q53S33 107 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 ATXN7L2Q5T6C5 722 aaPredicted RBP13.24□□□□□ -0.29
CNOT1-220ENST00000569916 NAPEPLDQ6IQ20 393 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 PARS2Q7L3T8 475 aaKnown RBP13.24□□□□□ -0.29
CNOT1-220ENST00000569916 ADAT2Q7Z6V5 191 aaKnown RBP13.24□□□□□ -0.29
CNOT1-220ENST00000569916 PRPF39Q86UA1 669 aaKnown RBP13.24□□□□□ -0.29
CNOT1-220ENST00000569916 CPNE8Q86YQ8 564 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 CNGA4Q8IV77 575 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 RYBPQ8N488 228 aaPredicted RBP13.24□□□□□ -0.29
CNOT1-220ENST00000569916 TEKT4Q8WW24 435 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 CTNNBL1Q8WYA6 563 aaPredicted RBP13.24□□□□□ -0.29
CNOT1-220ENST00000569916 LRIG1Q96JA1 1093 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 SERAC1Q96JX3 654 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 GDAP1L1Q96MZ0 367 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 DEF6Q9H4E7 631 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 AASDHPPTQ9NRN7 309 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 SPTLC3Q9NUV7 552 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 CTTNBP2NLQ9P2B4 639 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 UVRAGQ9P2Y5 699 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 UBA2Q9UBT2 640 aaPredicted RBP13.24□□□□□ -0.29
CNOT1-220ENST00000569916 MFHAS1Q9Y4C4 1052 aa13.24□□□□□ -0.29
CNOT1-220ENST00000569916 SHROOM3Q8TF72 1996 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 CNOT1A5YKK6 2376 aaKnown RBP13.23□□□□□ -0.29
CNOT1-220ENST00000569916 ARHGAP42A6NI28 874 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 AKR1B15C9JRZ8 316 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-220ENST00000569916 H3BRJ5 948 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 KRIT1O00522 736 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 AKR1B10O60218 316 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 POP4O95707 220 aaKnown RBP13.23□□□□□ -0.29
CNOT1-220ENST00000569916 IGSF6O95976 241 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 H2AFZP0C0S5 128 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 TMEM253P0C7T8 217 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 CD38P28907 300 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 NUDT1P36639 197 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 ARL4AP40617 200 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 CYTH1Q15438 398 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 TSR1Q2NL82 804 aaKnown RBP13.23□□□□□ -0.29
CNOT1-220ENST00000569916 MYLK3Q32MK0 819 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 SETMARQ53H47 684 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-220ENST00000569916 ZNF805Q5CZA5 627 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 N4BP2L1Q5TBK1 243 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-220ENST00000569916 NEK5Q6P3R8 708 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 ARHGAP36Q6ZRI8 547 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 H2AFVQ71UI9 128 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 POLNQ7Z5Q5 900 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 TP53INP2Q8IXH6 220 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 TSC1Q92574 1164 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 CSPG4P5Q96PW8 444 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 TRIM5Q9C035 493 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 SLC32A1Q9H598 525 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 NHEJ1Q9H9Q4 299 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-220ENST00000569916 PCDH18Q9HCL0 1135 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 TM7SF3Q9NS93 570 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 ETNK2Q9NVF9 386 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 ZFR2Q9UPR6 939 aaKnown RBP13.23□□□□□ -0.29
CNOT1-220ENST00000569916 DMTF1Q9Y222 760 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 LRRK1Q38SD2 2015 aa13.23□□□□□ -0.29
CNOT1-220ENST00000569916 NCOR2Q9Y618 2525 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 SPTBN2O15020 2390 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 TRPM6Q9BX84 2022 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 A0A1W2PQU0 124 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 C16orf96A6NNT2 1141 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 H0Y8X5 98 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 DFFAO00273 331 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 PROSCO94903 275 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 UGT2B4P06133 528 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 AMPD1P23109 780 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 ABL2P42684 1182 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 C21orf59P57076 290 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 ZNF423Q2M1K9 1284 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 ZNF284Q2VY69 593 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 TMEM259Q4ZIN3 620 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 SEL1L3Q68CR1 1132 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 FBXL19Q6PCT2 694 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 HORMAD1Q86X24 394 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 NAXDQ8IW45 347 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 LZTR1Q8N653 840 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 FAM71BQ8TC56 605 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 EXOC2Q96KP1 924 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 CCDC42Q96M95 316 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 KLHL32Q96NJ5 620 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 OSBPL1AQ9BXW6 950 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 RBSNQ9H1K0 784 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 FADS3Q9Y5Q0 445 aa13.22□□□□□ -0.29
CNOT1-220ENST00000569916 PRAMEF26H0Y7S4 382 aa13.21□□□□□ -0.29
CNOT1-220ENST00000569916 KCNK3O14649 394 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms