RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ASAP2O43150 1006 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 LIASO43766 372 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 TMCC2O75069 709 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 CKMT1AP12532 417 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 UNGP13051 313 aaPredicted RBP3.99□□□□□ -1.77
SPG11-218ENST00000559754 GYS1P13807 737 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 SERPINA4P29622 427 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 ART1P52961 327 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 CLNS1AP54105 237 aaKnown RBP3.99□□□□□ -1.77
SPG11-218ENST00000559754 GAS1P54826 345 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 RRP1P56182 461 aaKnown RBP3.99□□□□□ -1.77
SPG11-218ENST00000559754 ABATP80404 500 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 TLE2Q04725 743 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 TRAF1Q13077 416 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 MYBPC2Q14324 1141 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 GXYLT1Q4G148 440 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 PRAMEF19Q5SWL8 479 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 TTC22Q5TAA0 569 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 DGAT2L7PQ6IED9 249 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 JMJD6Q6NYC1 403 aaPredicted RBP3.99□□□□□ -1.77
SPG11-218ENST00000559754 C8orf82Q6P1X6 216 aaPredicted RBP3.99□□□□□ -1.77
SPG11-218ENST00000559754 MTFR2Q6P444 385 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 KIAA1324Q6UXG2 1013 aaKnown RBP3.99□□□□□ -1.77
SPG11-218ENST00000559754 FAM83HQ6ZRV2 1179 aaPredicted RBP3.99□□□□□ -1.77
SPG11-218ENST00000559754 ZNF367Q7RTV3 350 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 LRRTM4Q86VH4 590 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 PALB2Q86YC2 1186 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 ZDHHC23Q8IYP9 409 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 CLEC18CQ8NCF0 446 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 SPPL3Q8TCT6 385 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 SLC35F5Q8WV83 523 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 TREX2Q9BQ50 279 aaPredicted RBP3.99□□□□□ -1.77
SPG11-218ENST00000559754 RSPH9Q9H1X1 276 aaPredicted RBP3.99□□□□□ -1.77
SPG11-218ENST00000559754 PABPC3Q9H361 631 aaKnown RBP3.99□□□□□ -1.77
SPG11-218ENST00000559754 PRDM8Q9NQV8 689 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 SLC22A11Q9NSA0 550 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 GGA3Q9NZ52 723 aa3.99□□□□□ -1.77
SPG11-218ENST00000559754 TRIP12Q14669 1992 aaPredicted RBP3.98□□□□□ -1.77
SPG11-218ENST00000559754 A0A1W2PRQ8 180 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 C17orf102A2RUQ5 167 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 IPO5O00410 1097 aaKnown RBP3.98□□□□□ -1.77
SPG11-218ENST00000559754 POLBP06746 335 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 MMP3P08254 477 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 ENO3P13929 434 aaPredicted RBP3.98□□□□□ -1.77
SPG11-218ENST00000559754 TYK2P29597 1187 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 RFX5P48382 616 aaPredicted RBP3.98□□□□□ -1.77
SPG11-218ENST00000559754 CLCNKBP51801 687 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 NAP1L1P55209 391 aaKnown RBP3.98□□□□□ -1.77
SPG11-218ENST00000559754 RPL36AP83881 106 aaKnown RBP3.98□□□□□ -1.77
SPG11-218ENST00000559754 GALNTL6Q49A17 601 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 TDRD12Q587J7 1177 aaKnown RBP3.98□□□□□ -1.77
SPG11-218ENST00000559754 AADACL2Q6P093 401 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 Q6ZTC4 211 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 NEK10Q6ZWH5 1172 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 VPS52Q8N1B4 723 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 HORMAD2Q8N7B1 307 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 PTGR2Q8N8N7 351 aaPredicted RBP3.98□□□□□ -1.77
SPG11-218ENST00000559754 OR1N1Q8NGS0 311 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 TMEM163Q8TC26 289 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 STT3BQ8TCJ2 826 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 HDAC7Q8WUI4 952 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 FAR1Q8WVX9 515 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 KCNJ9Q92806 393 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 ARRDC3Q96B67 414 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 C3orf49Q96BT1 292 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 PYM1Q9BRP8 204 aaKnown RBP3.98□□□□□ -1.77
SPG11-218ENST00000559754 CADM1Q9BY67 442 aaKnown RBP3.98□□□□□ -1.77
SPG11-218ENST00000559754 PLEKHA5Q9HAU0 1116 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 KIF17Q9P2E2 1029 aa3.98□□□□□ -1.77
SPG11-218ENST00000559754 SRPRBQ9Y5M8 271 aaKnown RBP3.98□□□□□ -1.77
SPG11-218ENST00000559754 A0A087X0M5 115 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 CCDC196A0A1B0GTZ2 297 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 A0A1B0GX30 115 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 NPIPB13A6NJU9 1138 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 NPIPB5A8MRT5 1133 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 NPIPB4C9JG80 1138 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 I6L893 689 aaPredicted RBP3.97□□□□□ -1.77
SPG11-218ENST00000559754 GFPT2O94808 682 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 FCGR1AP12314 374 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 FCGR2AP12318 317 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 GNLYP22749 145 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 CNTFP26441 200 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 RAD52P43351 418 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 RPS6KA3P51812 740 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 NUDT6P53370 316 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 CDH12P55289 794 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 SEC61A1P61619 476 aaKnown RBP3.97□□□□□ -1.77
SPG11-218ENST00000559754 VAMP2P63027 116 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 HYAL1Q12794 435 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 DCTN1Q14203 1278 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 IZUMO4Q1ZYL8 232 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 ADCK5Q3MIX3 580 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 ALDH1L2Q3SY69 923 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 CCDC184Q52MB2 194 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 GPATCH4Q5T3I0 446 aaKnown RBP3.97□□□□□ -1.77
SPG11-218ENST00000559754 ANKRD45Q5TZF3 282 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 TMEM268Q5VZI3 342 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 ITPRIPL1Q6GPH6 555 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 NCAPH2Q6IBW4 605 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 TMEM71Q6P5X7 295 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms