RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 A0A096LPK6 155 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 C1orf232A0A0U1RR37 186 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 TMEM114B3SHH9 223 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 AKR1A1P14550 325 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 TLX1P31314 330 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 ATP13A4Q4VNC1 1196 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 TRAPPC11Q7Z392 1133 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 GPSM1Q86YR5 675 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 SERPINB12Q96P63 405 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 DNMT3LQ9UJW3 386 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 MTSS1O43312 755 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 CDH16O75309 829 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 TPBGLP0DKB5 382 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 TSNQ15631 228 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 CYP2A13Q16696 494 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 MTDHQ86UE4 582 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 ZBTB46Q86UZ6 589 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 C12orf50Q8NA57 414 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 VANGL1Q8TAA9 524 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 ZCCHC2Q9C0B9 1178 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 FBXO44Q9H4M3 255 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 CATSPERZQ9NTU4 200 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 CLIC5Q9NZA1 410 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 SEPT3Q9UH03 358 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 DUSP10Q9Y6W6 482 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 GJB1P08034 283 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 ZNF7P17097 686 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 POU5F2Q8N7G0 328 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 WRAP53Q9BUR4 548 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 OSGEPQ9NPF4 335 aa18.1■□□□□ 0.49
CACNA1A-227ENST00000636549 BIRC5O15392 142 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 RPS12P25398 132 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 PFKFB4Q16877 469 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 KBTBD12Q3ZCT8 623 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 EID3Q8N140 333 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 KAT2AQ92830 837 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 NKD1Q969G9 470 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 CDHR5Q9HBB8 845 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 DAPK2Q9UIK4 370 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 PACSIN3Q9UKS6 424 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 ZNF232Q9UNY5 417 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 PPP2R3BQ9Y5P8 575 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 DDTLA6NHG4 134 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 H2AFXP16104 143 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 TMC5Q6UXY8 1006 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 CHMP1AQ9HD42 196 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 ACSS2Q9NR19 701 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 SPATA31A1Q5TZJ5 1347 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 MTRF1O75570 445 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 CYP11B1P15538 503 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 CCNG2Q16589 344 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 FBXO15Q8NCQ5 510 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 OR14C36Q8NHC7 312 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 ARIH1Q9Y4X5 557 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 ANO9A1A5B4 782 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 RHOBTB3O94955 611 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 SRGNP10124 158 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 MINDY4Q4G0A6 757 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 TMEM132CQ8N3T6 1108 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 SLC28A3Q9HAS3 691 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 RIMKLBQ9ULI2 386 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 EFCAB10A6NFE3 127 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 PHGDHO43175 533 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 STX5Q13190 355 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 N4BP2L1Q5TBK1 243 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 WSCD1Q658N2 575 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 PNPT1Q8TCS8 783 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 ATL1Q8WXF7 558 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 GAL3ST3Q96A11 431 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 TINF2Q9BSI4 451 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 ALG9Q9H6U8 611 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 ELOVL2Q9NXB9 296 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 NRKQ7Z2Y5 1582 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 DISP1Q96F81 1524 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 MANSC4A6NHS7 340 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 KCNH1O95259 989 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 GIMD1P0DJR0 217 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 HK2P52789 917 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 XKR6Q5GH73 641 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 CCNYL2Q5T2Q4 361 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 RETSATQ6NUM9 610 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 DEFB106AQ8N104 65 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 OR2L5Q8NG80 312 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 INTS10Q9NVR2 710 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 UXTQ9UBK9 157 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 TIMM8BQ9Y5J9 83 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 TRPV2Q9Y5S1 764 aa18.09■□□□□ 0.49
CACNA1A-227ENST00000636549 PDE5AO76074 875 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 LSP1P33241 339 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 PTPN5P54829 565 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 ITGA9Q13797 1035 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 ZIK1Q3SY52 487 aaPredicted RBP18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 SLC30A9Q6PML9 568 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 LRRC34Q8IZ02 419 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 KCNN2Q9H2S1 579 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 H3BSH0 61 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 GNB5O14775 395 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 UBDO15205 165 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 UQCRBP14927 111 aa18.08■□□□□ 0.49
CACNA1A-227ENST00000636549 CPA3P15088 417 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms