RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CRHR1P34998 444 aa5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 RPL14P50914 215 aaKnown RBP5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 LIMK2P53671 638 aa5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 KCNJ11Q14654 390 aa5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 CYTH1Q15438 398 aa5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 CCDC153Q494R4 210 aa5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 TNFAIP8L3Q5GJ75 292 aa5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 RIPOR1Q6ZS17 1223 aa5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 ULK2Q8IYT8 1036 aa5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 CXorf38Q8TB03 319 aa5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 FBXO32Q969P5 355 aa5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 SEPT5Q99719 369 aaPredicted RBP5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 RUVBL2Q9Y230 463 aaKnown RBP5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 COL2A1P02458 1487 aaPredicted RBP5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 TAF1P21675 1872 aa5.74□□□□□ -1.49
SYNCRIP-204ENST00000616122 GOLGA8CPA6NN73 597 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 TK2O00142 265 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 NRP1O14786 923 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 STAU1O95793 577 aaKnown RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 SERPINA6P08185 405 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PAX7P23759 505 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CACNA2D1P54289 1103 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PKNOX1P55347 436 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PCID2Q5JVF3 399 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 FSTL4Q6MZW2 842 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 HFE2Q6ZVN8 426 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 TREML1Q86YW5 311 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 SPATA22Q8NHS9 363 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 KCTD4Q8WVF5 259 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PPP1R14AQ96A00 147 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 SNX27Q96L92 541 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PDP2Q9P2J9 529 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 BAG5Q9UL15 447 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CDH9Q9ULB4 789 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 AURKCQ9UQB9 309 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MYH8P13535 1937 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 TCRBV5S1A1TA0A578 114 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 AP2A1O95782 977 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MT-CYBP00156 380 aaPredicted RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MMP3P08254 477 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 DLDP09622 509 aaKnown RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PROZP22891 400 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 ETV4P43268 484 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 SCNN1BP51168 640 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 ACTR3P61158 418 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 TWF1Q12792 350 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 SPANXN3Q5MJ09 141 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 TCHHL1Q5QJ38 904 aaPredicted RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 GRTP1Q5TC63 336 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 LCA5Q86VQ0 697 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PPP2R3CQ969Q6 453 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 ULK4Q96C45 1275 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PCED1BQ96HM7 432 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PPP1R2P1Q96PQ5 205 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 DDX50Q9BQ39 737 aaKnown RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CDHR5Q9HBB8 845 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 ZFYVE28Q9HCC9 887 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MRPL40Q9NQ50 206 aaKnown RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CYLDQ9NQC7 956 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CACNG4Q9UBN1 327 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 WASF2Q9Y6W5 498 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 FAM95CA0A1B0GW59 222 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MAGEA13PA6NCF6 341 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 F8W8V4 182 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 DAB1O75553 588 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 RFPL1O75677 317 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 ENDOD1O94919 500 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 ATP5F1P24539 256 aaPredicted RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CD52P31358 61 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 AVPR1AP37288 418 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 KLF10Q13118 480 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 NAB1Q13506 487 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 BLMHQ13867 455 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CTXN3Q4LDR2 81 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 VWA5B1Q5TIE3 1220 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 IYDQ6PHW0 289 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CCDC126Q96EE4 140 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 SIKE1Q9BRV8 207 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 TRPV6Q9H1D0 765 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 GLOD4Q9HC38 313 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 ENTPD7Q9NQZ7 604 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PAPOLBQ9NRJ5 636 aaKnown RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MARCH2Q9P0N8 246 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 SIRPGQ9P1W8 387 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 HEATR9A2RTY3 570 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 TRPC5OSA6NMA1 111 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 BHMG1C9JSJ3 638 aaPredicted RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 TLR5O60602 858 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PIRTP0C851 137 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 IL4RP24394 825 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 HOXA11P31270 313 aaPredicted RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 MSX2P35548 267 aaPredicted RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 SOX11P35716 441 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 PDE1CQ14123 709 aaPredicted RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 KRT72Q14CN4 511 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 INTS6LQ5JSJ4 861 aaKnown RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 TEDDM1Q5T9Z0 273 aa5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 CTU1Q7Z7A3 348 aaKnown RBP5.73□□□□□ -1.49
SYNCRIP-204ENST00000616122 C10orf107Q8IVU9 208 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms