RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CCDC154A6NI56 674 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 FGRP09769 529 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 MLH1P40692 756 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 XRCC4Q13426 336 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 PDK4Q16654 411 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 USP45Q70EL2 814 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 ZNF513Q8N8E2 541 aaPredicted RBP19.45■□□□□ 0.7
COL27A1-207ENST00000494090 FNDC5Q8NAU1 212 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 ADAM32Q8TC27 787 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 PIWIL2Q8TC59 973 aaKnown RBP19.45■□□□□ 0.7
COL27A1-207ENST00000494090 WNT8BQ93098 351 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 C19orf60Q96EN9 201 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 SAE1Q9UBE0 346 aaPredicted RBP19.45■□□□□ 0.7
COL27A1-207ENST00000494090 REXO2Q9Y3B8 237 aaKnown RBP19.45■□□□□ 0.7
COL27A1-207ENST00000494090 TNPO3Q9Y5L0 923 aaKnown RBP19.45■□□□□ 0.7
COL27A1-207ENST00000494090 INPP4BO15327 924 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 RGS5O15539 181 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 MMP13P45452 471 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 IKBKEQ14164 716 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 SH3BP4Q9P0V3 963 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 ADAM28Q9UKQ2 775 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 TNFSF13BQ9Y275 285 aa19.45■□□□□ 0.7
COL27A1-207ENST00000494090 DRD4P21917 467 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 ACOX1Q15067 660 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 PAGE2BQ5JRK9 111 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 MED8Q96G25 268 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 TKTL2Q9H0I9 626 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 UBA1P22314 1058 aaKnown RBP19.44■□□□□ 0.7
COL27A1-207ENST00000494090 MAP1SQ66K74 1059 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-207ENST00000494090 MAML3Q96JK9 1138 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 HSD17B14Q9BPX1 270 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 C2orf49Q9BVC5 232 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-207ENST00000494090 PIF1Q9H611 641 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 CLOCKO15516 846 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 PIGNO95427 931 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 FGFR1P11362 822 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 POLR2EP19388 210 aaKnown RBP19.44■□□□□ 0.7
COL27A1-207ENST00000494090 PSEN1P49768 467 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 SLC39A12Q504Y0 691 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 CRELD2Q6UXH1 353 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-207ENST00000494090 POLNQ7Z5Q5 900 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 MILR1Q7Z6M3 343 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 FIG4Q92562 907 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 MYRFQ9Y2G1 1151 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 OPLAHO14841 1288 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 ZBTB14O43829 449 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 TSPAN3O60637 253 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 SPATA31C1P0DKV0 1188 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 MARCKSL1P49006 195 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 FRG1Q14331 258 aaKnown RBP19.44■□□□□ 0.7
COL27A1-207ENST00000494090 C15orf59Q2T9L4 293 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-207ENST00000494090 C4orf32Q8N8J7 132 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 TNFRSF25Q93038 417 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 MTERF3Q96E29 417 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 SATB2Q9UPW6 733 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 TALDO1P37837 337 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 GRIK5Q16478 980 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 C16orf46Q6P387 395 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 NPNTQ6UXI9 565 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 TMEM26Q6ZUK4 368 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 SENP8Q96LD8 212 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 EVA1BQ9NVM1 165 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 COPG2Q9UBF2 871 aa19.44■□□□□ 0.7
COL27A1-207ENST00000494090 CALCAP01258 141 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 IL5RAQ01344 420 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 BOP1Q14137 746 aaKnown RBP19.43■□□□□ 0.7
COL27A1-207ENST00000494090 PCID2Q5JVF3 399 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 PLEKHA7Q6IQ23 1121 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 NET1Q7Z628 596 aaPredicted RBP19.43■□□□□ 0.7
COL27A1-207ENST00000494090 METTL3Q86U44 580 aaKnown RBP19.43■□□□□ 0.7
COL27A1-207ENST00000494090 MAGED4Q96JG8 741 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 RNF157Q96PX1 679 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 C9orf16Q9BUW7 83 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 UGT2B28Q9BY64 529 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 MRPS26Q9BYN8 205 aaKnown RBP19.43■□□□□ 0.7
COL27A1-207ENST00000494090 PHACTR1Q9C0D0 580 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 SMPD4Q9NXE4 827 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 AKAP7Q9P0M2 348 aaPredicted RBP19.43■□□□□ 0.7
COL27A1-207ENST00000494090 RGS14O43566 566 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 HPCAL1P37235 193 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 GPR15P49685 360 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 ALFQ53S48 1182 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 LRRC49Q8IUZ0 686 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 EID3Q8N140 333 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 METTL6Q8TCB7 284 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 HSFY1Q96LI6 401 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 OSBPL6Q9BZF3 934 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 ADPRHL2Q9NX46 363 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 ARHGAP28Q9P2N2 729 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 GTF2A1LQ9UNN4 478 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 CRYL1Q9Y2S2 319 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 CHKAP35790 457 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 ATP5C1P36542 298 aaKnown RBP19.43■□□□□ 0.7
COL27A1-207ENST00000494090 IFNGR2P38484 337 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 ALDH9A1P49189 494 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 FUT2Q10981 343 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 GSTA3Q16772 222 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 BBS12Q6ZW61 710 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 NECAB2Q7Z6G3 386 aa19.43■□□□□ 0.7
COL27A1-207ENST00000494090 C18orf25Q96B23 403 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms