RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 HOXB8P17481 243 aaPredicted RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 VGLL4Q14135 290 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 ARSHQ5FYA8 562 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 GPSM1Q86YR5 675 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 CERS5Q8N5B7 392 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 RNF148Q8N7C7 305 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 ITFG1Q8TB96 612 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 CERS2Q96G23 380 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 APOL4Q9BPW4 351 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 ADPRHL2Q9NX46 363 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 OR12D3Q9UGF7 316 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 CRYL1Q9Y2S2 319 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 COPG1Q9Y678 874 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 CLOCKO15516 846 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 PARNO95453 639 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 HSMCR30P0CW71 290 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 ATP4AP20648 1035 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 PKNOX1P55347 436 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 SFSWAPQ12872 951 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 RETSATQ6NUM9 610 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 IL27RAQ6UWB1 636 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 PLPPR4Q7Z2D5 763 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 SOCS4Q8WXH5 440 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 MTFMTQ96DP5 389 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 SENP8Q96LD8 212 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 SEMA4BQ9NPR2 832 aaPredicted RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 VIRMAQ69YN4 1812 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 SPATA31C2B4DYI2 1134 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 NPM3O75607 178 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 PIK3R1P27986 724 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 HPCAL1P37235 193 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 HK2P52789 917 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 TGM3Q08188 693 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 ZC3H12AQ5D1E8 599 aaKnown RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 ARCQ7LC44 396 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 ZNF513Q8N8E2 541 aaPredicted RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 METTL6Q8TCB7 284 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 ALG9Q9H6U8 611 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 SYBUQ9NX95 663 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 CACNA2D2Q9NY47 1150 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 STMN3Q9NZ72 180 aa11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 UXTQ9UBK9 157 aaPredicted RBP11.08□□□□□ -0.64
SNRNP200-201ENST00000323853 CYP2C18P33260 490 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 PPIL2Q13356 520 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 UBAP2LQ14157 1087 aaKnown RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 SETD9Q8NE22 299 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 AGAP11Q8TF27 550 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 MTERF3Q96E29 417 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 PWWP2AQ96N64 755 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 FAM192AQ9GZU8 254 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 RIBC2Q9H4K1 309 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 RNPEPL1Q9HAU8 725 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 AHSPQ9NZD4 102 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 COPG2Q9UBF2 871 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 STK39Q9UEW8 545 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 ATXN2Q99700 1313 aaKnown RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 ZNF839A8K0R7 811 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 FAM220BPB1ANY3 271 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 TGFB1I1O43294 461 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 BCL10O95999 233 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 SMIM10L2AP0DMW4 78 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 SMIM10L2BP0DMW5 78 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 OTUD3Q5T2D3 398 aaPredicted RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 WSCD1Q658N2 575 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 NECAB2Q7Z6G3 386 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 OR8H2Q8N162 312 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 PDGFDQ9GZP0 370 aaPredicted RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 FBXO6Q9NRD1 293 aaPredicted RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 PCDHAC2Q9Y5I4 1007 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 BCL9LQ86UU0 1499 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 ERBB2P04626 1255 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 CD86P42081 329 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 FUT2Q10981 343 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 RDH11Q8TC12 318 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 PIWIL2Q8TC59 973 aaKnown RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 DAPK2Q9UIK4 370 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 SATB2Q9UPW6 733 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 IPPQ9Y573 584 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 PCDHB12Q9Y5F1 795 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 IFRD1O00458 451 aaPredicted RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 LCA5LO95447 670 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 NFKB1P19838 968 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 PIK3CGP48736 1102 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 BCL2L1Q07817 233 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 EXOC3L1Q86VI1 746 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 FAM126BQ8IXS8 530 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 STK40Q8N2I9 435 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 STN1Q9H668 368 aaKnown RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 KLHL3Q9UH77 587 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 RICTORQ6R327 1708 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 DDNO94850 711 aaPredicted RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 FGFR3P22607 806 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 GRIA4P48058 902 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 PLK1P53350 603 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 DEFB128Q7Z7B8 93 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 TMEM139Q8IV31 216 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 ZNF276Q8N554 614 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 IL31RAQ8NI17 732 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 STARD8Q92502 1023 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 COPS5Q92905 334 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms