RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 FBXL12Q9NXK8 326 aa15.69■□□□□ 0.1
TRIM28-203ENST00000593582 EIF2B4Q9UI10 523 aaKnown RBP15.69■□□□□ 0.1
TRIM28-203ENST00000593582 OR51B4Q9Y5P0 310 aa15.69■□□□□ 0.1
TRIM28-203ENST00000593582 SPTBN2O15020 2390 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 IGLV3-10A0A075B6K4 115 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 SYCE3A1L190 88 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 ANKRD62A6NC57 917 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 C2CD4BA6NLJ0 364 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 MID1O15344 667 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 BCAT2O15382 392 aaPredicted RBP15.68■□□□□ 0.1
TRIM28-203ENST00000593582 RNASEH2AO75792 299 aaKnown RBP15.68■□□□□ 0.1
TRIM28-203ENST00000593582 ADH1BP00325 375 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 RHOCP08134 193 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 ADRB1P08588 477 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 PTMSP20962 102 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 OR1E1P30953 314 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 SLC8A1P32418 973 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 PTPN9P43378 593 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 PSMD8P48556 350 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 TPM4P67936 248 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 C1QBPQ07021 282 aaKnown RBP15.68■□□□□ 0.1
TRIM28-203ENST00000593582 C15orf59Q2T9L4 293 aaPredicted RBP15.68■□□□□ 0.1
TRIM28-203ENST00000593582 PSAPL1Q6NUJ1 521 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 MON1BQ7L1V2 547 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 STRADAQ7RTN6 431 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 TFAP2DQ7Z6R9 452 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 STK40Q8N2I9 435 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 MINDY1Q8N5J2 469 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 C3orf20Q8ND61 904 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 FAM129BQ96TA1 746 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 FUCA2Q9BTY2 467 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 ZDHHC5Q9C0B5 715 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 ZYG11BQ9C0D3 744 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 MPP6Q9NZW5 540 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.68■□□□□ 0.1
TRIM28-203ENST00000593582 CEP192Q8TEP8 1941 aa15.68■□□□□ 0.1
TRIM28-203ENST00000593582 A0A1W2PP55 124 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 A0A1W2PQC6 194 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 SIGLEC16A6NMB1 481 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 ATP9BO43861 1147 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 OPHN1O60890 802 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 GJB6O95452 261 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 SERPINC1P01008 464 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 IL1BP01584 269 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 C5AR1P21730 350 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 RFC1P35251 1148 aaPredicted RBP15.67■□□□□ 0.1
TRIM28-203ENST00000593582 ADRA1BP35368 520 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 NOVA1P51513 510 aaKnown RBP15.67■□□□□ 0.1
TRIM28-203ENST00000593582 IQCB1Q15051 598 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 SH3PXD2AQ5TCZ1 1133 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 DNAJC24Q6P3W2 148 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 IRF2BP2Q7Z5L9 587 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 DSG4Q86SJ6 1040 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 JOSD2Q8TAC2 188 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 FRS2Q8WU20 508 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 OR8D1Q8WZ84 308 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 BAP1Q92560 729 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 OR12D3Q9UGF7 316 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 FZD4Q9ULV1 537 aa15.67■□□□□ 0.1
TRIM28-203ENST00000593582 A0A1B0GTH6 734 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 FAM47DPA6NHR8 397 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 LRRC72A6NJI9 287 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 LRRC53A6NM62 1247 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 FSBPO95073 299 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 CEACAM1P13688 526 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 VAV1P15498 845 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 CSRP1P21291 193 aaKnown RBP15.66■□□□□ 0.1
TRIM28-203ENST00000593582 TNFAIP3P21580 790 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 GPD1P21695 349 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 AFF3P51826 1226 aaKnown RBP15.66■□□□□ 0.1
TRIM28-203ENST00000593582 GRIK2Q13002 908 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 DLG2Q15700 870 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 ACAD10Q6JQN1 1059 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 PPP1R2P3Q6NXS1 205 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 ZNF783Q6ZMS7 281 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 SH2D3CQ8N5H7 860 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 DCAF4L2Q8NA75 395 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 ATP11CQ8NB49 1132 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 FAM172AQ8WUF8 416 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 CENPIQ92674 756 aaPredicted RBP15.66■□□□□ 0.1
TRIM28-203ENST00000593582 BIRC7Q96CA5 298 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 NAP1L5Q96NT1 182 aaPredicted RBP15.66■□□□□ 0.1
TRIM28-203ENST00000593582 NEUROG2Q9H2A3 272 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 SLC32A1Q9H598 525 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 PPARGC1AQ9UBK2 798 aaKnown RBP15.66■□□□□ 0.1
TRIM28-203ENST00000593582 SERGEFQ9UGK8 458 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 ADAMTS1Q9UHI8 967 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 HS3ST2Q9Y278 367 aa15.66■□□□□ 0.1
TRIM28-203ENST00000593582 A0A0D9SEW6 157 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 ILVBLA1L0T0 632 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 SNAP91O60641 907 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 GOT1P17174 413 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 CD27P26842 260 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 GALCP54803 685 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 HDAC4P56524 1084 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 NRG1Q02297 640 aaPredicted RBP15.65■□□□□ 0.1
TRIM28-203ENST00000593582 NR1I3Q14994 352 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 ASIC2Q16515 512 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 RAB6CQ53S08 254 aa15.65■□□□□ 0.1
TRIM28-203ENST00000593582 N4BP2L1Q5TBK1 243 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms