RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 PER2O15055 1255 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 CHADO15335 359 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 WFS1O76024 890 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 LRIG2O94898 1065 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 AGTP01019 485 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 LRG1P02750 347 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 VAV1P15498 845 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 EPCAMP16422 314 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 ERCC2P18074 760 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 RBL1P28749 1068 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 CCR1P32246 355 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 TPI1P60174 286 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 MLLT1Q03111 559 aaPredicted RBP9.07□□□□□ -0.96
DDB1-213ENST00000539332 E2F5Q15329 346 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 QPCTQ16769 361 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 C4orf46Q504U0 113 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 SDE2Q6IQ49 451 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 ADGRD2Q7Z7M1 963 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 RBM23Q86U06 439 aaKnown RBP9.07□□□□□ -0.96
DDB1-213ENST00000539332 ITIH5Q86UX2 942 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 TEX9Q8N6V9 391 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 SLC22A17Q8WUG5 538 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 ZNF512Q96ME7 567 aaPredicted RBP9.07□□□□□ -0.96
DDB1-213ENST00000539332 KLC2Q9H0B6 622 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 CDC42EP4Q9H3Q1 356 aaKnown RBP9.07□□□□□ -0.96
DDB1-213ENST00000539332 OR12D3Q9UGF7 316 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 BAIAP2L1Q9UHR4 511 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 CORO1CQ9ULV4 474 aaPredicted RBP9.07□□□□□ -0.96
DDB1-213ENST00000539332 ASB3Q9Y575 518 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 C2orf16Q68DN1 1984 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 RFXAPO00287 272 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 NCAM2O15394 837 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 KCNN4O15554 427 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 MSI1O43347 362 aaKnown RBP9.07□□□□□ -0.96
DDB1-213ENST00000539332 TMEM63AO94886 807 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 TTC4O95801 387 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 ABHD2P08910 425 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 SLC2A3P11169 496 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 GCKP35557 465 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 MMP13P45452 471 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 CCNG1P51959 295 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 RING1Q06587 406 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 ZNF33AQ06730 810 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 GALNT2Q10471 571 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 PDK1Q15118 436 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 TRIP4Q15650 581 aaPredicted RBP9.07□□□□□ -0.96
DDB1-213ENST00000539332 PPM1LQ5SGD2 360 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 C6orf118Q5T5N4 469 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 UBAP2Q5T6F2 1119 aaKnown RBP9.07□□□□□ -0.96
DDB1-213ENST00000539332 ANKRD22Q5VYY1 191 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 DENND2CQ68D51 928 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 RTL10Q7L3V2 364 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 TRPM8Q7Z2W7 1104 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 ZNF683Q8IZ20 524 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 SDR16C5Q8N3Y7 309 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 PDZD8Q8NEN9 1154 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 NSMCE1Q8WV22 266 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 TFB1MQ8WVM0 346 aaKnown RBP9.07□□□□□ -0.96
DDB1-213ENST00000539332 HDAC11Q96DB2 347 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 MRPL38Q96DV4 380 aaKnown RBP9.07□□□□□ -0.96
DDB1-213ENST00000539332 C1orf74Q96LT6 269 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 ZNF317Q96PQ6 595 aaPredicted RBP9.07□□□□□ -0.96
DDB1-213ENST00000539332 BRD8Q9H0E9 1235 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 TLE6Q9H808 572 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 MAN1C1Q9NR34 630 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 SFMBT1Q9UHJ3 866 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 NUDT5Q9UKK9 219 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 HCFC2Q9Y5Z7 792 aa9.07□□□□□ -0.96
DDB1-213ENST00000539332 PRUNE2Q8WUY3 3088 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 MYLKQ15746 1914 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 A0A1W2PPC1 479 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 ZNF840PA6NDX5 716 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 WASH4PA8MWX3 477 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 FGF10O15520 208 aaPredicted RBP9.06□□□□□ -0.96
DDB1-213ENST00000539332 TLR5O60602 858 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 PAGE1O75459 146 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 RFPL2O75678 378 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 TCEA3O75764 348 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 SERPINB6P35237 376 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 NRIP1P48552 1158 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 NRLP54845 237 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 LRIT3Q3SXY7 679 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 ACBD5Q5T8D3 534 aaPredicted RBP9.06□□□□□ -0.96
DDB1-213ENST00000539332 KLHDC10Q6PID8 442 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 PDZD4Q76G19 769 aaPredicted RBP9.06□□□□□ -0.96
DDB1-213ENST00000539332 TAOK1Q7L7X3 1001 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 TMEM150AQ86TG1 271 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 ELMOD1Q8N336 334 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 NPWQ8N729 165 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 MCUQ8NE86 351 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 OR2W6PQ8NHA6 318 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 PWWP2AQ96N64 755 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 CDK5RAP1Q96SZ6 601 aaKnown RBP9.06□□□□□ -0.96
DDB1-213ENST00000539332 RBM15Q96T37 977 aaKnown RBP eCLIP9.06□□□□□ -0.96
DDB1-213ENST00000539332 FRMD8Q9BZ67 464 aaPredicted RBP9.06□□□□□ -0.96
DDB1-213ENST00000539332 ZNF576Q9H609 170 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 CCSER2Q9H7U1 834 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 ZNF334Q9HCZ1 680 aaPredicted RBP9.06□□□□□ -0.96
DDB1-213ENST00000539332 NINJ2Q9NZG7 142 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 UXTQ9UBK9 157 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms