RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 KCNJ12Q14500 433 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 TAF1BQ53T94 588 aaPredicted RBP16.34■□□□□ 0.21
HDDC2-210ENST00000609574 DCAF6Q58WW2 860 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 PMF1Q6P1K2 205 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 KRBA2Q6ZNG9 492 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 LGI2Q8N0V4 545 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 FAM149B1Q96BN6 582 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 LMLNQ96KR4 655 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 SPAG5Q96R06 1193 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 LGMNQ99538 433 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 EVA1BQ9NVM1 165 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 ARMCX3Q9UH62 379 aaPredicted RBP16.34■□□□□ 0.21
HDDC2-210ENST00000609574 SLCO3A1Q9UIG8 710 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 INTS6Q9UL03 887 aaKnown RBP16.34■□□□□ 0.21
HDDC2-210ENST00000609574 COQ4Q9Y3A0 265 aa16.34■□□□□ 0.21
HDDC2-210ENST00000609574 SLC7A4O43246 635 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 BRINP1O60477 761 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 MZF1P28698 734 aaPredicted RBP16.33■□□□□ 0.2
HDDC2-210ENST00000609574 CTSOP43234 321 aaPredicted RBP16.33■□□□□ 0.2
HDDC2-210ENST00000609574 CXADRP78310 365 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 ACCSLQ4AC99 568 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 CBWD6Q4V339 395 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 ZCWPW2Q504Y3 356 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 SETMARQ53H47 684 aaPredicted RBP16.33■□□□□ 0.2
HDDC2-210ENST00000609574 FSCBQ5H9T9 825 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 CBWD3Q5JTY5 395 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 CBWD5Q5RIA9 395 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 NADSYN1Q6IA69 706 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 MMS22LQ6ZRQ5 1243 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 CHSY1Q86X52 802 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 LSMEM2Q8N112 164 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 AADATQ8N5Z0 425 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 OR8D1Q8WZ84 308 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 KLHDC7BQ96G42 594 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 RPL10LQ96L21 214 aaKnown RBP16.33■□□□□ 0.2
HDDC2-210ENST00000609574 NT5C1BQ96P26 610 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 NUCKS1Q9H1E3 243 aaKnown RBP16.33■□□□□ 0.2
HDDC2-210ENST00000609574 ST7Q9NRC1 585 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 ITIH6Q6UXX5 1313 aa16.33■□□□□ 0.2
HDDC2-210ENST00000609574 C1QTNF3-AMACRE9PGA6 284 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 F5H5T6 163 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 PRAMEF26H0Y7S4 382 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 WNT9AO14904 365 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 MT-CO3P00414 261 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 ALPPL2P10696 532 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 ACP1P24666 158 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 MAT2AP31153 395 aaKnown RBP16.32■□□□□ 0.2
HDDC2-210ENST00000609574 ACADSBP45954 432 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 UCNP55089 124 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 ZNF211Q13398 564 aaPredicted RBP16.32■□□□□ 0.2
HDDC2-210ENST00000609574 TBC1D25Q3MII6 688 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 PKDCCQ504Y2 493 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 ATP6V0D2Q8N8Y2 350 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 ZNF248Q8NDW4 579 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 DQX1Q8TE96 717 aaKnown RBP16.32■□□□□ 0.2
HDDC2-210ENST00000609574 PTPRN2Q92932 1015 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 RNF34Q969K3 372 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 BTN2A3PQ96KV6 586 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 FCRL2Q96LA5 508 aaPredicted RBP16.32■□□□□ 0.2
HDDC2-210ENST00000609574 PRICKLE1Q96MT3 831 aaPredicted RBP16.32■□□□□ 0.2
HDDC2-210ENST00000609574 GTPBP4Q9BZE4 634 aaKnown RBP16.32■□□□□ 0.2
HDDC2-210ENST00000609574 METTL14Q9HCE5 456 aaKnown RBP16.32■□□□□ 0.2
HDDC2-210ENST00000609574 CYTH4Q9UIA0 394 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 SLC25A13Q9UJS0 675 aa16.32■□□□□ 0.2
HDDC2-210ENST00000609574 FARP1Q9Y4F1 1045 aaPredicted RBP16.32■□□□□ 0.2
HDDC2-210ENST00000609574 LATO43561 262 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 RNGTTO60942 597 aaKnown RBP16.31■□□□□ 0.2
HDDC2-210ENST00000609574 TACR2P21452 398 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 CFHR1Q03591 330 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 RABGAP1LQ5R372 815 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 TTC39BQ5VTQ0 682 aaPredicted RBP16.31■□□□□ 0.2
HDDC2-210ENST00000609574 SFMBT2Q5VUG0 894 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 KDM7AQ6ZMT4 941 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 PPM1KQ8N3J5 372 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 DCBLD1Q8N8Z6 715 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 RFFLQ8WZ73 363 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 TFAP2BQ92481 460 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 ZNF578Q96N58 590 aaPredicted RBP16.31■□□□□ 0.2
HDDC2-210ENST00000609574 MED15Q96RN5 788 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 ABCG4Q9H172 646 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 NAALADL1Q9UQQ1 740 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 ATP6V1DQ9Y5K8 247 aa16.31■□□□□ 0.2
HDDC2-210ENST00000609574 ERVH48-1M5A8F1 160 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 ZNF202O95125 648 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 SLC2A3P11169 496 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 PLA2G2AP14555 144 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 BRD2P25440 801 aaKnown RBP16.3■□□□□ 0.2
HDDC2-210ENST00000609574 DUSP3P51452 185 aaPredicted RBP16.3■□□□□ 0.2
HDDC2-210ENST00000609574 PCBP4P57723 403 aaKnown RBP16.3■□□□□ 0.2
HDDC2-210ENST00000609574 INSM1Q01101 510 aaPredicted RBP16.3■□□□□ 0.2
HDDC2-210ENST00000609574 TLE3Q04726 772 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 KCNH2Q12809 1159 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 RAP1GAP2Q684P5 730 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 TRIM69Q86WT6 500 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 SPATS2Q86XZ4 545 aaKnown RBP16.3■□□□□ 0.2
HDDC2-210ENST00000609574 SPACA3Q8IXA5 215 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 SMYD4Q8IYR2 804 aaPredicted RBP16.3■□□□□ 0.2
HDDC2-210ENST00000609574 APCDD1Q8J025 514 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 ZNF843Q8N446 348 aa16.3■□□□□ 0.2
HDDC2-210ENST00000609574 CLEC4CQ8WTT0 213 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms