RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 C10orf88Q9H8K7 445 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 MYO10Q9HD67 2058 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 PRDM6Q9NQX0 595 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 HOMER3Q9NSC5 361 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 DONSONQ9NYP3 566 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 DTLQ9NZJ0 730 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 DNPEPQ9ULA0 475 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 NUMBLQ9Y6R0 609 aa10.71□□□□□ -0.69
TPM1-221ENST00000559831 COL4A3Q01955 1670 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 ARHGAP42A6NI28 874 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 RASA4BC9J798 803 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 PPP1R12AO14974 1030 aaPredicted RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 RASA4O43374 803 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 RAMP2O60895 175 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 ECI2O75521 394 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 ADH1CP00326 375 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 RBP3P10745 1247 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 ADH5P11766 374 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 GDI1P31150 447 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 CHRNA3P32297 505 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 COILP38432 576 aaPredicted RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 NDST2P52849 883 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 MRPS25P82663 173 aaKnown RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 AP1B1Q10567 949 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 BYSLQ13895 437 aaKnown RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 POLD3Q15054 466 aaPredicted RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 PDK1Q15118 436 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 PDGFRLQ15198 375 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 DHCR24Q15392 516 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 SMAD2Q15796 467 aaKnown RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 CYP1B1Q16678 543 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 FYB2Q5VWT5 728 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 TTC27Q6P3X3 843 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 RHBDF2Q6PJF5 856 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 CCDC137Q6PK04 289 aaKnown RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 ARHGAP36Q6ZRI8 547 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 CDKL3Q8IVW4 592 aaPredicted RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 ARHGAP12Q8IWW6 846 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 CCDC105Q8IYK2 499 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 ADGRG2Q8IZP9 1017 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 UMODL1-AS1Q8N2C9 162 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 ATPAF2Q8N5M1 289 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 KIAA1958Q8N8K9 716 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 NAT16Q8N8M0 369 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 C12orf50Q8NA57 414 aaPredicted RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 CCNYQ8ND76 341 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 TTC8Q8TAM2 541 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 WFDC5Q8TCV5 224 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 DEPDC1BQ8WUY9 529 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 RSAD2Q8WXG1 361 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 ATP2A3Q93084 1043 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 HMCESQ96FZ2 354 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 P2RY11Q96G91 374 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 OLFM3Q96PB7 478 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 TRMT61BQ9BVS5 477 aaKnown RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 FRMD8P1Q9BZ68 369 aaPredicted RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 KLC2Q9H0B6 622 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 MUC3BQ9H195 1237 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 RETREG1Q9H6L5 497 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 NOL6Q9H6R4 1146 aaKnown RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 LRRC19Q9H756 370 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 SEPT10Q9P0V9 454 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 ZNF212Q9UDV6 495 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 ZNF148Q9UQR1 794 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 FAM50BQ9Y247 325 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 RAD54BQ9Y620 910 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 MYO18AQ92614 2054 aaKnown RBP10.7□□□□□ -0.7
TPM1-221ENST00000559831 KIAA1549LQ6ZVL6 1849 aa10.7□□□□□ -0.7
TPM1-221ENST00000559831 REV3LO60673 3130 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 ANHXE9PGG2 379 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 PENKP01210 267 aaPredicted RBP10.69□□□□□ -0.7
TPM1-221ENST00000559831 TYRP14679 529 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 IL9P15248 144 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 MX2P20592 715 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 ACVRL1P37023 503 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 CSKP41240 450 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 FNTAP49354 379 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 PAPOLAP51003 745 aaKnown RBP10.69□□□□□ -0.7
TPM1-221ENST00000559831 GNA12Q03113 381 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 GAD2Q05329 585 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 TNK2Q07912 1038 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 FCHO2Q0JRZ9 810 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 GALNT2Q10471 571 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 KCTD19Q17RG1 926 aaPredicted RBP10.69□□□□□ -0.7
TPM1-221ENST00000559831 PUS10Q3MIT2 529 aaKnown RBP10.69□□□□□ -0.7
TPM1-221ENST00000559831 TEX35Q5T0J7 233 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 RNF219Q5W0B1 726 aaPredicted RBP10.69□□□□□ -0.7
TPM1-221ENST00000559831 AFMIDQ63HM1 303 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 IL31Q6EBC2 164 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 CXorf57Q6NSI4 855 aaKnown RBP10.69□□□□□ -0.7
TPM1-221ENST00000559831 GSTA5Q7RTV2 222 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 SETD3Q86TU7 594 aaPredicted RBP10.69□□□□□ -0.7
TPM1-221ENST00000559831 CPA6Q8N4T0 437 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 NOA1Q8NC60 698 aaKnown RBP10.69□□□□□ -0.7
TPM1-221ENST00000559831 OR7D4Q8NG98 312 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 OR52K2Q8NGK3 314 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 SLC35B2Q8TB61 432 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 TFB1MQ8WVM0 346 aaKnown RBP10.69□□□□□ -0.7
TPM1-221ENST00000559831 QKIQ96PU8 341 aaKnown RBP eCLIP10.69□□□□□ -0.7
TPM1-221ENST00000559831 LGMNQ99538 433 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms