RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 COL3A1P02461 1466 aaPredicted RBP15.65■□□□□ 0.1
CLN8-212ENST00000637083 TNRQ92752 1358 aa15.65■□□□□ 0.1
CLN8-212ENST00000637083 ZBTB47Q9UFB7 747 aaPredicted RBP15.65■□□□□ 0.1
CLN8-212ENST00000637083 PNPLA6Q8IY17 1366 aa15.65■□□□□ 0.1
CLN8-212ENST00000637083 RARSP54136 660 aaKnown RBP15.65■□□□□ 0.1
CLN8-212ENST00000637083 IL16Q14005 1332 aa15.64■□□□□ 0.09
CLN8-212ENST00000637083 WASLO00401 505 aaPredicted RBP15.63■□□□□ 0.09
CLN8-212ENST00000637083 NEFMP07197 916 aa15.63■□□□□ 0.09
CLN8-212ENST00000637083 KNDC1Q76NI1 1749 aa15.63■□□□□ 0.09
CLN8-212ENST00000637083 METP08581 1390 aa15.63■□□□□ 0.09
CLN8-212ENST00000637083 TECPR2O15040 1411 aa15.63■□□□□ 0.09
CLN8-212ENST00000637083 PLEKHF1Q96S99 279 aa15.63■□□□□ 0.09
CLN8-212ENST00000637083 NRXN3Q9Y4C0 1643 aa15.62■□□□□ 0.09
CLN8-212ENST00000637083 EDC4Q6P2E9 1401 aaKnown RBP15.62■□□□□ 0.09
CLN8-212ENST00000637083 TMPOP42166 694 aaKnown RBP15.61■□□□□ 0.09
CLN8-212ENST00000637083 TXNDC2Q86VQ3 553 aa15.61■□□□□ 0.09
CLN8-212ENST00000637083 CLUAP1Q96AJ1 413 aa15.61■□□□□ 0.09
CLN8-212ENST00000637083 FCHSD2O94868 740 aa15.61■□□□□ 0.09
CLN8-212ENST00000637083 PMFBP1Q8TBY8 1022 aa15.6■□□□□ 0.09
CLN8-212ENST00000637083 FRAT1Q92837 279 aaPredicted RBP15.6■□□□□ 0.09
CLN8-212ENST00000637083 TMEM2Q9UHN6 1383 aa15.6■□□□□ 0.09
CLN8-212ENST00000637083 CDC42BPGQ6DT37 1551 aa15.6■□□□□ 0.09
CLN8-212ENST00000637083 CPSF1Q10570 1443 aaKnown RBP15.59■□□□□ 0.09
CLN8-212ENST00000637083 PPIP5K1Q6PFW1 1433 aa15.59■□□□□ 0.09
CLN8-212ENST00000637083 CPS1P31327 1500 aa15.59■□□□□ 0.09
CLN8-212ENST00000637083 DDRGK1Q96HY6 314 aa15.59■□□□□ 0.09
CLN8-212ENST00000637083 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
CLN8-212ENST00000637083 CEBPAP49715 358 aaPredicted RBP15.58■□□□□ 0.09
CLN8-212ENST00000637083 FAM161AQ3B820 660 aa15.58■□□□□ 0.09
CLN8-212ENST00000637083 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.58■□□□□ 0.08
CLN8-212ENST00000637083 COG6Q9Y2V7 657 aa15.58■□□□□ 0.08
CLN8-212ENST00000637083 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
CLN8-212ENST00000637083 NUDT16Q96DE0 195 aaKnown RBP15.57■□□□□ 0.08
CLN8-212ENST00000637083 UBR1Q8IWV7 1749 aa15.57■□□□□ 0.08
CLN8-212ENST00000637083 AATKQ6ZMQ8 1374 aa15.57■□□□□ 0.08
CLN8-212ENST00000637083 RIPK4P57078 832 aa15.56■□□□□ 0.08
CLN8-212ENST00000637083 NPM2Q86SE8 214 aaKnown RBP15.56■□□□□ 0.08
CLN8-212ENST00000637083 PANK1Q8TE04 598 aa15.56■□□□□ 0.08
CLN8-212ENST00000637083 CALD1Q05682 793 aaKnown RBP15.56■□□□□ 0.08
CLN8-212ENST00000637083 ZKSCAN2Q63HK3 967 aa15.56■□□□□ 0.08
CLN8-212ENST00000637083 POLKQ9UBT6 870 aa15.56■□□□□ 0.08
CLN8-212ENST00000637083 LTKP29376 864 aa15.55■□□□□ 0.08
CLN8-212ENST00000637083 TRIM35Q9UPQ4 493 aa15.55■□□□□ 0.08
CLN8-212ENST00000637083 COG3Q96JB2 828 aa15.55■□□□□ 0.08
CLN8-212ENST00000637083 PLEKHG1Q9ULL1 1385 aa15.54■□□□□ 0.08
CLN8-212ENST00000637083 CDK12Q9NYV4 1490 aaPredicted RBP15.53■□□□□ 0.08
CLN8-212ENST00000637083 ZNF428Q96B54 188 aa15.53■□□□□ 0.08
CLN8-212ENST00000637083 FTSJ3Q8IY81 847 aaKnown RBP15.53■□□□□ 0.08
CLN8-212ENST00000637083 FBLN1P23142 703 aa15.52■□□□□ 0.08
CLN8-212ENST00000637083 EXOSC9Q06265 439 aaKnown RBP15.52■□□□□ 0.08
CLN8-212ENST00000637083 DZIP1LQ8IYY4 767 aaKnown RBP15.52■□□□□ 0.08
CLN8-212ENST00000637083 RWDD1Q9H446 243 aaPredicted RBP15.52■□□□□ 0.08
CLN8-212ENST00000637083 EID1Q9Y6B2 187 aa15.52■□□□□ 0.08
CLN8-212ENST00000637083 MON2Q7Z3U7 1717 aa15.52■□□□□ 0.07
CLN8-212ENST00000637083 PPM1GO15355 546 aaPredicted RBP15.51■□□□□ 0.07
CLN8-212ENST00000637083 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
CLN8-212ENST00000637083 RGS3P49796 1198 aa15.51■□□□□ 0.07
CLN8-212ENST00000637083 RSPH6AQ9H0K4 717 aa15.51■□□□□ 0.07
CLN8-212ENST00000637083 SMC4Q9NTJ3 1288 aa15.51■□□□□ 0.07
CLN8-212ENST00000637083 NCKAP5LQ9HCH0 1330 aa15.51■□□□□ 0.07
CLN8-212ENST00000637083 IPO8O15397 1037 aaKnown RBP15.51■□□□□ 0.07
CLN8-212ENST00000637083 IGHDP01880 384 aa15.51■□□□□ 0.07
CLN8-212ENST00000637083 MVPQ14764 893 aaKnown RBP15.51■□□□□ 0.07
CLN8-212ENST00000637083 ADAMTS13Q76LX8 1427 aa15.5■□□□□ 0.07
CLN8-212ENST00000637083 LRRC7Q96NW7 1537 aa15.5■□□□□ 0.07
CLN8-212ENST00000637083 ITSN1Q15811 1721 aa15.5■□□□□ 0.07
CLN8-212ENST00000637083 PRKAR2BP31323 418 aa15.5■□□□□ 0.07
CLN8-212ENST00000637083 ALDH1L2Q3SY69 923 aa15.5■□□□□ 0.07
CLN8-212ENST00000637083 KIF16BQ96L93 1317 aa15.5■□□□□ 0.07
CLN8-212ENST00000637083 LMOD3Q0VAK6 560 aa15.5■□□□□ 0.07
CLN8-212ENST00000637083 NFE2L2Q16236 605 aa15.5■□□□□ 0.07
CLN8-212ENST00000637083 TSR2Q969E8 191 aaKnown RBP15.5■□□□□ 0.07
CLN8-212ENST00000637083 BCL2L13Q9BXK5 485 aa15.5■□□□□ 0.07
CLN8-212ENST00000637083 ROBO2Q9HCK4 1378 aa15.5■□□□□ 0.07
CLN8-212ENST00000637083 AKAP12Q02952 1782 aa15.49■□□□□ 0.07
CLN8-212ENST00000637083 NME9Q86XW9 330 aa15.49■□□□□ 0.07
CLN8-212ENST00000637083 MAP2P11137 1827 aaKnown RBP15.49■□□□□ 0.07
CLN8-212ENST00000637083 C8orf34Q49A92 452 aa15.48■□□□□ 0.07
CLN8-212ENST00000637083 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
CLN8-212ENST00000637083 SKAP1Q86WV1 359 aa15.48■□□□□ 0.07
CLN8-212ENST00000637083 DDX19BQ9UMR2 479 aa15.48■□□□□ 0.07
CLN8-212ENST00000637083 IL13P35225 146 aa15.48■□□□□ 0.07
CLN8-212ENST00000637083 SLC26A8Q96RN1 970 aa15.48■□□□□ 0.07
CLN8-212ENST00000637083 C3P01024 1663 aa15.47■□□□□ 0.07
CLN8-212ENST00000637083 RLBP1P12271 317 aa15.47■□□□□ 0.07
CLN8-212ENST00000637083 ATF7IPQ6VMQ6 1270 aa15.47■□□□□ 0.07
CLN8-212ENST00000637083 PRR36Q9H6K5 1346 aa15.47■□□□□ 0.07
CLN8-212ENST00000637083 PLEKHG3A1L390 1219 aa15.46■□□□□ 0.07
CLN8-212ENST00000637083 CHMP4BQ9H444 224 aaKnown RBP15.46■□□□□ 0.07
CLN8-212ENST00000637083 DAXXQ9UER7 740 aaPredicted RBP15.46■□□□□ 0.07
CLN8-212ENST00000637083 ZRANB1Q9UGI0 708 aa15.46■□□□□ 0.07
CLN8-212ENST00000637083 EMILIN1Q9Y6C2 1016 aa15.46■□□□□ 0.07
CLN8-212ENST00000637083 GNAI1P63096 354 aa15.46■□□□□ 0.07
CLN8-212ENST00000637083 SSH1Q8WYL5 1049 aa15.46■□□□□ 0.07
CLN8-212ENST00000637083 BRPF1P55201 1214 aaPredicted RBP15.45■□□□□ 0.06
CLN8-212ENST00000637083 SLIT1O75093 1534 aa15.45■□□□□ 0.06
CLN8-212ENST00000637083 IFT57Q9NWB7 429 aa15.44■□□□□ 0.06
CLN8-212ENST00000637083 TBX22Q9Y458 520 aa15.44■□□□□ 0.06
CLN8-212ENST00000637083 ARHGAP23Q9P227 1491 aa15.44■□□□□ 0.06
CLN8-212ENST00000637083 THEMISQ8N1K5 641 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms