RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 MON1BQ7L1V2 547 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 C14orf80Q86SX3 495 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 METTL3Q86U44 580 aaKnown RBP23.2■■□□□ 1.3
TRAF4-207ENST00000461195 TMPRSS6Q8IU80 811 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 RXFP2Q8WXD0 754 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 SELENOOQ9BVL4 669 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 MKRN2Q9H000 416 aaKnown RBP23.2■■□□□ 1.3
TRAF4-207ENST00000461195 CYP8B1Q9UNU6 501 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 CEP192Q8TEP8 1941 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 IGHV1OR15-9A0A0B4J2B8 117 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 BCLAF3A2AJT9 711 aaKnown RBP23.19■■□□□ 1.3
TRAF4-207ENST00000461195 PRR5-ARHGAP8B1AHC4 643 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 I6L893 689 aaPredicted RBP23.19■■□□□ 1.3
TRAF4-207ENST00000461195 ENDOD1O94919 500 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 ZNF806P0C7X5 589 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 KRT3P12035 628 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 DHPSP49366 369 aaPredicted RBP23.19■■□□□ 1.3
TRAF4-207ENST00000461195 COPAP53621 1224 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 ARHGAP8P85298 464 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 ATP11AP98196 1134 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 CCDC6Q16204 474 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 PLEKHG6Q3KR16 790 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 C5orf22Q49AR2 442 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 FIGNQ5HY92 759 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 SFMBT2Q5VUG0 894 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 TMEFF1Q8IYR6 380 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 ZNF366Q8N895 744 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 C3orf20Q8ND61 904 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 OR2T3Q8NH03 318 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 JOSD2Q8TAC2 188 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 PRCCQ92733 491 aaPredicted RBP23.19■■□□□ 1.3
TRAF4-207ENST00000461195 SIPA1Q96FS4 1042 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 C1orf74Q96LT6 269 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 SYT11Q9BT88 431 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 TTYH3Q9C0H2 523 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 VPS45Q9NRW7 570 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 AIPL1Q9NZN9 384 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 SUN2Q9UH99 717 aa23.19■■□□□ 1.3
TRAF4-207ENST00000461195 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.19■■□□□ 1.3
TRAF4-207ENST00000461195 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.18■■□□□ 1.3
TRAF4-207ENST00000461195 C2CD4BA6NLJ0 364 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 AP5Z1O43299 807 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 CLDN11O75508 207 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 GJB6O95452 261 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 RPL6Q02878 288 aaKnown RBP23.18■■□□□ 1.3
TRAF4-207ENST00000461195 ZNF177Q13360 481 aaPredicted RBP23.18■■□□□ 1.3
TRAF4-207ENST00000461195 CCDC14Q49A88 953 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 ACAD10Q6JQN1 1059 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 PPP1R2P3Q6NXS1 205 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 LRRC31Q6UY01 552 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 CYP2U1Q7Z449 544 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 FAM131BQ86XD5 332 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 APCDD1Q8J025 514 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 KDM1BQ8NB78 822 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 HAPLN3Q96S86 360 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 PPP1R9BQ96SB3 815 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 NUP58Q9BVL2 599 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 FBRSQ9HAH7 460 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 ERVW-1Q9UQF0 538 aa23.18■■□□□ 1.3
TRAF4-207ENST00000461195 TNRC6BQ9UPQ9 1833 aaKnown RBP23.17■■□□□ 1.3
TRAF4-207ENST00000461195 SRPRAP08240 638 aaKnown RBP23.17■■□□□ 1.3
TRAF4-207ENST00000461195 PTPN9P43378 593 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 IRAK1P51617 712 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 PLK1P53350 603 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 CDH4P55283 916 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 ECT2LQ008S8 904 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 CDO1Q16878 200 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 C15orf59Q2T9L4 293 aaPredicted RBP23.17■■□□□ 1.3
TRAF4-207ENST00000461195 CXorf57Q6NSI4 855 aaKnown RBP23.17■■□□□ 1.3
TRAF4-207ENST00000461195 C12orf50Q8NA57 414 aaPredicted RBP23.17■■□□□ 1.3
TRAF4-207ENST00000461195 MYO19Q96H55 970 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 MRGPRX3Q96LB0 322 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 CD93Q9NPY3 652 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 ITM2CQ9NQX7 267 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 TMPRSS4Q9NRS4 437 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 USP36Q9P275 1121 aaKnown RBP23.17■■□□□ 1.3
TRAF4-207ENST00000461195 SNX10Q9Y5X0 201 aa23.17■■□□□ 1.3
TRAF4-207ENST00000461195 SIGLEC16A6NMB1 481 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 ACADMP11310 421 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 SDHBP21912 280 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 MZF1P28698 734 aaPredicted RBP23.16■■□□□ 1.3
TRAF4-207ENST00000461195 RFC1P35251 1148 aaPredicted RBP23.16■■□□□ 1.3
TRAF4-207ENST00000461195 PBX1P40424 430 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 PRKCIP41743 596 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 CTSOP43234 321 aaPredicted RBP23.16■■□□□ 1.3
TRAF4-207ENST00000461195 SF3A2Q15428 464 aaKnown RBP23.16■■□□□ 1.3
TRAF4-207ENST00000461195 RNF219Q5W0B1 726 aaPredicted RBP23.16■■□□□ 1.3
TRAF4-207ENST00000461195 DNAJC24Q6P3W2 148 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 ARMCX6Q7L4S7 300 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 STRADAQ7RTN6 431 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 ZNF683Q8IZ20 524 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 MCOLN2Q8IZK6 566 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 HAUS4Q9H6D7 363 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 PRSS16Q9NQE7 514 aa23.16■■□□□ 1.3
TRAF4-207ENST00000461195 TPRP12270 2363 aaKnown RBP23.15■■□□□ 1.3
TRAF4-207ENST00000461195 NDUFS2O75306 463 aa23.15■■□□□ 1.3
TRAF4-207ENST00000461195 CNTN5O94779 1100 aa23.15■■□□□ 1.3
TRAF4-207ENST00000461195 GPD1P21695 349 aa23.15■■□□□ 1.3
TRAF4-207ENST00000461195 PTGER3P43115 390 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms