RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 TPI1P60174 286 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 RBM10P98175 930 aaKnown RBP9.78□□□□□ -0.84
VTA1-201ENST00000367621 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 XRCC4Q13426 336 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 CUL1Q13616 776 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 AUHQ13825 339 aaKnown RBP9.78□□□□□ -0.84
VTA1-201ENST00000367621 KCNC3Q14003 757 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 RAB30Q15771 203 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 C5orf22Q49AR2 442 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 FAM133BQ5BKY9 247 aaKnown RBP9.78□□□□□ -0.84
VTA1-201ENST00000367621 AFMIDQ63HM1 303 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 TXNDC8Q6A555 127 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 NLRP14Q86W24 1093 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 ARHGAP12Q8IWW6 846 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 CCDC33Q8N5R6 958 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.78□□□□□ -0.84
VTA1-201ENST00000367621 GRK7Q8WTQ7 553 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 IFT81Q8WYA0 676 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 ART4Q93070 314 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 IGSF8Q969P0 613 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 BTN2A3PQ96KV6 586 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 QKIQ96PU8 341 aaKnown RBP eCLIP9.78□□□□□ -0.84
VTA1-201ENST00000367621 TRIM31Q9BZY9 425 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 ADAM7Q9H2U9 754 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 NOL6Q9H6R4 1146 aaKnown RBP9.78□□□□□ -0.84
VTA1-201ENST00000367621 HCFC1R1Q9NWW0 138 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 DNMT3BQ9UBC3 853 aaKnown RBP9.78□□□□□ -0.84
VTA1-201ENST00000367621 FEZ2Q9UHY8 353 aaPredicted RBP9.78□□□□□ -0.84
VTA1-201ENST00000367621 MSRAQ9UJ68 235 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 ZNF148Q9UQR1 794 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 UTP11Q9Y3A2 253 aaKnown RBP9.78□□□□□ -0.84
VTA1-201ENST00000367621 HEY1Q9Y5J3 304 aa9.78□□□□□ -0.84
VTA1-201ENST00000367621 CEP290O15078 2479 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 PLXNA4Q9HCM2 1894 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 RFXAPO00287 272 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 GFRA2O00451 464 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 MCF2LO15068 1137 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 STC2O76061 302 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 KRT14P02533 472 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 APOEP02649 317 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 SRGAP2BP0DMP2 458 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 VAV1P15498 845 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 MCM3P25205 808 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 GABRR2P28476 465 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 RBL1P28749 1068 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 EPHB2P29323 1055 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 HOXA9P31269 272 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 RPL22P35268 128 aaKnown RBP9.77□□□□□ -0.85
VTA1-201ENST00000367621 CYP4F8P98187 520 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 LMNB2Q03252 620 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 PRKD1Q15139 912 aaPredicted RBP9.77□□□□□ -0.85
VTA1-201ENST00000367621 TAF12Q16514 161 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 DUSP6Q16828 381 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 PABPC1LQ4VXU2 614 aaKnown RBP9.77□□□□□ -0.85
VTA1-201ENST00000367621 SLC45A4Q5BKX6 768 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 PPM1LQ5SGD2 360 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 STXBP5Q5T5C0 1151 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 FBXL22Q6P050 247 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 DARS2Q6PI48 645 aaKnown RBP9.77□□□□□ -0.85
VTA1-201ENST00000367621 RHBDF2Q6PJF5 856 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 TADA2BQ86TJ2 420 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 ZC3H18Q86VM9 953 aaKnown RBP9.77□□□□□ -0.85
VTA1-201ENST00000367621 ARL14EPQ8N8R7 260 aaPredicted RBP9.77□□□□□ -0.85
VTA1-201ENST00000367621 ATP6V0D2Q8N8Y2 350 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 FAM71DQ8N9W8 422 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 SHKBP1Q8TBC3 707 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 ZSCAN18Q8TBC5 510 aaPredicted RBP9.77□□□□□ -0.85
VTA1-201ENST00000367621 GDPD5Q8WTR4 605 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 ARNTL2Q8WYA1 636 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 HPS1Q92902 700 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 AZIN2Q96A70 460 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 PLD4Q96BZ4 506 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 TBC1D31Q96DN5 1066 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 TCEAL4Q96EI5 215 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 CCDC114Q96M63 670 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 LGMNQ99538 433 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 USB1Q9BQ65 265 aaKnown RBP9.77□□□□□ -0.85
VTA1-201ENST00000367621 CORO1BQ9BR76 489 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 SLC46A2Q9BY10 475 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 TXLNGYQ9BZA5 131 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 RAB17Q9H0T7 212 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 LMAN2LQ9H0V9 348 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 PCDH9Q9HC56 1237 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 FAM114A2Q9NRY5 505 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 NDFIP2Q9NV92 336 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 WHRNQ9P202 907 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 PPARGC1AQ9UBK2 798 aaKnown RBP9.77□□□□□ -0.85
VTA1-201ENST00000367621 STOML2Q9UJZ1 356 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 HCFC2Q9Y5Z7 792 aa9.77□□□□□ -0.85
VTA1-201ENST00000367621 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.76□□□□□ -0.85
VTA1-201ENST00000367621 HACD1B0YJ81 288 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 H7C0C1 242 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 ACSL4O60488 711 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 SASH3O75995 380 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 CNTN5O94779 1100 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 GAS8O95995 478 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 HNRNPA1P09651 372 aaKnown RBP eCLIP9.76□□□□□ -0.85
VTA1-201ENST00000367621 GJA1P17302 382 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 TACR2P21452 398 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 SLC6A4P31645 630 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms