RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 NDFIP2Q9NV92 336 aa24.04■■□□□ 1.44
SYMPK-212ENST00000598896 ZNF446Q9NWS9 450 aa24.04■■□□□ 1.44
SYMPK-212ENST00000598896 DNMT3BQ9UBC3 853 aaKnown RBP24.04■■□□□ 1.44
SYMPK-212ENST00000598896 NOTCH4Q99466 2003 aa24.04■■□□□ 1.44
SYMPK-212ENST00000598896 REV3LO60673 3130 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 BCLAF3A2AJT9 711 aaKnown RBP24.03■■□□□ 1.44
SYMPK-212ENST00000598896 FAM153BP0C7A2 387 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 IRF1P10914 325 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 HDCP19113 662 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 CDC25CP30307 473 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 EPHA5P54756 1037 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 FAM153CQ494X1 144 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 SLC45A4Q5BKX6 768 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 FBXL22Q6P050 247 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 DENND1CQ8IV53 801 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 EIF1ADQ8N9N8 165 aaKnown RBP24.03■■□□□ 1.44
SYMPK-212ENST00000598896 IGSF8Q969P0 613 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 QKIQ96PU8 341 aaKnown RBP eCLIP24.03■■□□□ 1.441e-8■■□□□ 12.3
SYMPK-212ENST00000598896 LMAN2LQ9H0V9 348 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 TLE6Q9H808 572 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 ARFGAP3Q9NP61 516 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 FAM153AQ9UHL3 310 aa24.03■■□□□ 1.44
SYMPK-212ENST00000598896 IGLV3-10A0A075B6K4 115 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 FGF10O15520 208 aaPredicted RBP24.02■■□□□ 1.44
SYMPK-212ENST00000598896 CORO1AP31146 461 aaKnown RBP24.02■■□□□ 1.44
SYMPK-212ENST00000598896 ADCY8P40145 1251 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 NRIP1P48552 1158 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 HARS2P49590 506 aaKnown RBP24.02■■□□□ 1.44
SYMPK-212ENST00000598896 FAM133BQ5BKY9 247 aaKnown RBP24.02■■□□□ 1.44
SYMPK-212ENST00000598896 ADAMTS19Q8TE59 1207 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 TCEAL4Q96EI5 215 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 PRDM12Q9H4Q4 367 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 NUP205Q92621 2012 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 KCNN4O15554 427 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 ACSL4O60488 711 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 HNRNPA1P09651 372 aaKnown RBP eCLIP24.02■■□□□ 1.44
SYMPK-212ENST00000598896 VAV1P15498 845 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 SLC6A4P31645 630 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 STIP1P31948 543 aaKnown RBP24.02■■□□□ 1.44
SYMPK-212ENST00000598896 DUSP6Q16828 381 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 BZW1Q7L1Q6 419 aaKnown RBP24.02■■□□□ 1.44
SYMPK-212ENST00000598896 NLRP14Q86W24 1093 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 CHSY1Q86X52 802 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 CDKL3Q8IVW4 592 aaPredicted RBP24.02■■□□□ 1.44
SYMPK-212ENST00000598896 SHKBP1Q8TBC3 707 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 FBXO25Q8TCJ0 367 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 SNF8Q96H20 258 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 CELF6Q96J87 481 aaKnown RBP24.02■■□□□ 1.44
SYMPK-212ENST00000598896 CATSPERBQ9H7T0 1116 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 PPARGC1AQ9UBK2 798 aaKnown RBP24.02■■□□□ 1.44
SYMPK-212ENST00000598896 CPQQ9Y646 472 aa24.02■■□□□ 1.44
SYMPK-212ENST00000598896 MOSPD3O75425 235 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 RHOP08100 348 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 PTPN2P17706 415 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 SERPINB6P35237 376 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 PLTPP55058 493 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 SLC5A9Q2M3M2 681 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 MAP9Q49MG5 647 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 ALFQ53S48 1182 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 RTL3Q8N8U3 475 aaKnown RBP24.01■■□□□ 1.43
SYMPK-212ENST00000598896 VN1R2Q8NFZ6 395 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 TFB1MQ8WVM0 346 aaKnown RBP24.01■■□□□ 1.43
SYMPK-212ENST00000598896 ZNF707Q96C28 371 aaPredicted RBP24.01■■□□□ 1.43
SYMPK-212ENST00000598896 TIFAQ96CG3 184 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 RTP4Q96DX8 246 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 ZDHHC7Q9NXF8 308 aa24.01■■□□□ 1.43
SYMPK-212ENST00000598896 CNTN5O94779 1100 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 TACR2P21452 398 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 RPL22P35268 128 aaKnown RBP24■■□□□ 1.43
SYMPK-212ENST00000598896 NTHL1P78549 312 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 SMAD3P84022 425 aaKnown RBP24■■□□□ 1.43
SYMPK-212ENST00000598896 GPS1Q13098 491 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 MTA1Q13330 715 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 PRKD1Q15139 912 aaPredicted RBP24■■□□□ 1.43
SYMPK-212ENST00000598896 P3H1Q32P28 736 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 CCHCR1Q8TD31 782 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 ART4Q93070 314 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 GCNAQ96QF7 691 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 WHRNQ9P202 907 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 AGO1Q9UL18 857 aaKnown RBP24■■□□□ 1.43
SYMPK-212ENST00000598896 SZT2Q5T011 3432 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 CCDC195A0A1B0GUA6 201 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 CFAP69A5D8W1 941 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 GREM1O60565 184 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 SLC11A2P49281 568 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 GALNT2Q10471 571 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 PDK1Q15118 436 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 RFWD3Q6PCD5 774 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 LRRC31Q6UY01 552 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 PDZD4Q76G19 769 aaPredicted RBP24■■□□□ 1.43
SYMPK-212ENST00000598896 CIR1Q86X95 450 aaPredicted RBP24■■□□□ 1.43
SYMPK-212ENST00000598896 ARHGAP12Q8IWW6 846 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 RPRD1AQ96P16 312 aaPredicted RBP24■■□□□ 1.43
SYMPK-212ENST00000598896 SLC46A2Q9BY10 475 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 PRKD2Q9BZL6 878 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 ZYG11BQ9C0D3 744 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 ADAM7Q9H2U9 754 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 RAD54BQ9Y620 910 aa24■■□□□ 1.43
SYMPK-212ENST00000598896 WASH4PA8MWX3 477 aa23.99■■□□□ 1.43
SYMPK-212ENST00000598896 HACD1B0YJ81 288 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms