RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 ARHGAP42A6NI28 874 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 CALRP27797 417 aaKnown RBP17.03■□□□□ 0.32
KDM2B-216ENST00000543025 LAMC2Q13753 1193 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 DCAF4L1Q3SXM0 396 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 EFHC1Q5JVL4 640 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 MTHFD1LQ6UB35 978 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 C10orf107Q8IVU9 208 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 PYROXD2Q8N2H3 581 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 LRRC52Q8N7C0 313 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 ANKRD52Q8NB46 1076 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 GSTCDQ8NEC7 633 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 SPDYE1Q8NFV5 336 aaPredicted RBP17.03■□□□□ 0.32
KDM2B-216ENST00000543025 LPIN3Q9BQK8 851 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 PIH1D1Q9NWS0 290 aaKnown RBP17.03■□□□□ 0.32
KDM2B-216ENST00000543025 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.03■□□□□ 0.32
KDM2B-216ENST00000543025 COPG2Q9UBF2 871 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 PPM1HQ9ULR3 514 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 PSAT1Q9Y617 370 aa17.03■□□□□ 0.32
KDM2B-216ENST00000543025 SCN1AP35498 2009 aa17.02■□□□□ 0.32
KDM2B-216ENST00000543025 MAP3K13O43283 966 aa17.02■□□□□ 0.32
KDM2B-216ENST00000543025 MFSD11O43934 449 aa17.02■□□□□ 0.32
KDM2B-216ENST00000543025 PROCP04070 461 aa17.02■□□□□ 0.32
KDM2B-216ENST00000543025 ADORA2BP29275 332 aa17.02■□□□□ 0.32
KDM2B-216ENST00000543025 ADGRG6Q86SQ4 1221 aa17.02■□□□□ 0.32
KDM2B-216ENST00000543025 ZMAT2Q96NC0 199 aaKnown RBP17.02■□□□□ 0.32
KDM2B-216ENST00000543025 TRAPPC9Q96Q05 1148 aa17.02■□□□□ 0.32
KDM2B-216ENST00000543025 SORT1Q99523 831 aa17.02■□□□□ 0.32
KDM2B-216ENST00000543025 CXCL16Q9H2A7 254 aa17.02■□□□□ 0.32
KDM2B-216ENST00000543025 PDP2Q9P2J9 529 aa17.02■□□□□ 0.32
KDM2B-216ENST00000543025 ZNF236Q9UL36 1845 aa17.02■□□□□ 0.32
KDM2B-216ENST00000543025 RNF103O00237 685 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 CHRM1P11229 460 aaPredicted RBP17.02■□□□□ 0.31
KDM2B-216ENST00000543025 CCDC130P13994 396 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 TYK2P29597 1187 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 ACADSBP45954 432 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 RPL34P49207 117 aaKnown RBP17.02■□□□□ 0.31
KDM2B-216ENST00000543025 GJC2Q5T442 439 aaPredicted RBP17.02■□□□□ 0.31
KDM2B-216ENST00000543025 BSPRYQ5W0U4 402 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 SLC30A9Q6PML9 568 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 MAVSQ7Z434 540 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 RASSF3Q86WH2 238 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 P2RY11Q96G91 374 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 PRDM16Q9HAZ2 1276 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 TUBGCP4Q9UGJ1 667 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 FZD10Q9ULW2 581 aa17.02■□□□□ 0.31
KDM2B-216ENST00000543025 ASB14A6NK59 587 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 PRKCGP05129 697 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 POLBP06746 335 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 ALOX15P16050 662 aaPredicted RBP17.01■□□□□ 0.31
KDM2B-216ENST00000543025 GARSP41250 739 aaKnown RBP17.01■□□□□ 0.31
KDM2B-216ENST00000543025 GLUD2P49448 558 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 IDH3AP50213 366 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 CDC16Q13042 620 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 THEMIS2Q5TEJ8 643 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 GPR142Q7Z601 462 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 FAM131BQ86XD5 332 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 POU5F2Q8N7G0 328 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 BEST2Q8NFU1 509 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 S100A14Q9HCY8 104 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 PAPOLBQ9NRJ5 636 aaKnown RBP17.01■□□□□ 0.31
KDM2B-216ENST00000543025 PNPOQ9NVS9 261 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 SYBUQ9NX95 663 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 SNTG2Q9NY99 539 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 TMEM216Q9P0N5 145 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 PCNTO95613 3336 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 CCNT2O60583 730 aaKnown RBP17.01■□□□□ 0.31
KDM2B-216ENST00000543025 USP1O94782 785 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 ZNF286BP0CG31 522 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 RALBP11234 206 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 MX2P20592 715 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 GP5P40197 560 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 ABCE1P61221 599 aaKnown RBP17.01■□□□□ 0.31
KDM2B-216ENST00000543025 PDPK2PQ6A1A2 396 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 CMTM5Q96DZ9 223 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 SNX27Q96L92 541 aa17.01■□□□□ 0.31
KDM2B-216ENST00000543025 DOCK3Q8IZD9 2030 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 HCRTO43612 131 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 GNAT1P11488 350 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 PSMB4P28070 264 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 MATKP42679 507 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 PAPOLAP51003 745 aaKnown RBP17■□□□□ 0.31
KDM2B-216ENST00000543025 ZBTB6Q15916 424 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 CCDC153Q494R4 210 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 PPM1JQ5JR12 505 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 ATG14Q6ZNE5 492 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 ARMCX2Q7L311 632 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 PSTKQ8IV42 348 aaKnown RBP17■□□□□ 0.31
KDM2B-216ENST00000543025 PGBD4Q96DM1 585 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 CERS2Q96G23 380 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 CPNE1Q99829 537 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 BUD23O43709 281 aaKnown RBP17■□□□□ 0.31
KDM2B-216ENST00000543025 LYNP07948 512 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 UBTFL6P0CB48 400 aaPredicted RBP17■□□□□ 0.31
KDM2B-216ENST00000543025 HARS2P49590 506 aaKnown RBP17■□□□□ 0.31
KDM2B-216ENST00000543025 SULT1E1P49888 294 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 DEUP1Q05D60 604 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 SLC25A52Q3SY17 297 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 RALGPS1Q5JS13 557 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 GRTP1Q5TC63 336 aa17■□□□□ 0.31
KDM2B-216ENST00000543025 PLEKHH3Q7Z736 793 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms