RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 IL37Q9NZH6 218 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 CDH9Q9ULB4 789 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 SNX9Q9Y5X1 595 aa7.5□□□□□ -1.21
PDLIM1-203ENST00000490391 DCHS2Q6V1P9 2916 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 TDRD6O60522 2096 aaKnown RBP7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 LY6G6EA0A0G2JKS1 128 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 FAM92AA1XBS5 289 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 TISP43B9A030 160 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 TLR4O00206 839 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 CTDNEP1O95476 244 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 ITGB3P05106 788 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 GIMD1P0DJR0 217 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 CKMT1AP12532 417 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 YWHAQP27348 245 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 ADH6P28332 368 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 TNFRSF8P28908 595 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 RBMS1P29558 406 aaKnown RBP7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 CASRP41180 1078 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 RPS14P62263 151 aaKnown RBP7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 POU5F1Q01860 360 aaKnown RBP7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 CYP27A1Q02318 531 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 ZBTB16Q05516 673 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 IFRD2Q12894 506 aaPredicted RBP7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 CLCA4Q14CN2 919 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 EIF4HQ15056 248 aaKnown RBP7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 FYB2Q5VWT5 728 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 SERPINA13PQ6UXR4 307 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 USP53Q70EK8 1073 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 PTRH1Q86Y79 214 aaKnown RBP7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 NT5DC4Q86YG4 428 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 DIS3L2Q8IYB7 885 aaKnown RBP7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 OXR1Q8N573 874 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 LRRC52Q8N7C0 313 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 ZNF366Q8N895 744 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 MYCBPAPQ8TBZ2 947 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 HTR3CQ8WXA8 447 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 FBXO32Q969P5 355 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 SKA1Q96BD8 255 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 ATXN7L3BQ96GX2 97 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 GZF1Q9H116 711 aaPredicted RBP7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 TMEM245Q9H330 911 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 CHORDC1Q9UHD1 332 aaPredicted RBP7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 KLF15Q9UIH9 416 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 SIX4Q9UIU6 781 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 KCNG1Q9UIX4 513 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 CLEC4EQ9ULY5 219 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 AGAP1Q9UPQ3 857 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 DNM3Q9UQ16 869 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 U3KQA8 63 aa7.49□□□□□ -1.21
PDLIM1-203ENST00000490391 PP2D1A8MPX8 630 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 ANKRD63C9JTQ0 380 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 H0YCG3 227 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 CYP26A1O43174 497 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 SDC3O75056 442 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 CDKL5O76039 1030 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 TBX18O95935 607 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 GP1BAP07359 652 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 H2AFB1P0C5Y9 115 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 H2AFB2P0C5Z0 115 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 RNF224P0DH78 156 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 PLCG1P19174 1290 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 MSX1P28360 303 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 GALCP54803 685 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 DAB2P98082 770 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 MAPRE1Q15691 268 aaKnown RBP7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 SDK2Q58EX2 2172 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 PRRT3Q5FWE3 981 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 NCEH1Q6PIU2 408 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 ANKS1BQ7Z6G8 1248 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 NUP93Q8N1F7 819 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 C4orf32Q8N8J7 132 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 IGSF22Q8N9C0 903 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 OR4C6Q8NH72 309 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 SCAMP5Q8TAC9 235 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 SNX29Q8TEQ0 813 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 UCMAQ8WVF2 138 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 FIZ1Q96SL8 496 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 FUCA2Q9BTY2 467 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 MMTAG2Q9BU76 263 aaKnown RBP7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 ZNF518BQ9C0D4 1074 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 BRMS1Q9HCU9 246 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 SERGEFQ9UGK8 458 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 PLAAQ9Y263 795 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 ENTPD2Q9Y5L3 495 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 STYXL1Q9Y6J8 313 aa7.48□□□□□ -1.21
PDLIM1-203ENST00000490391 NPHP3-ACAD11A0A0J9YXS1 232 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 TLR5O60602 858 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 RTN3O95197 1032 aaPredicted RBP7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 GJB6O95452 261 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 DNTTP04053 509 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 PDGFRBP09619 1106 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 WT1P19544 449 aaPredicted RBP7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 TGM2P21980 687 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 CD97P48960 835 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 PDX1P52945 283 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 TFAMQ00059 246 aaKnown RBP7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 CENPCQ03188 943 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 ORC2Q13416 577 aaPredicted RBP7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 ESPL1Q14674 2120 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms