RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	MED7	O43513	233 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	ACSL4	O60488	711 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	LMNA	P02545	664 aa	Known RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	GABRG2	P18507	467 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	BCKDHB	P21953	392 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	MMP8	P22894	467 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	PRKCH	P24723	683 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	SOX11	P35716	441 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	P2RY2	P41231	377 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	CDR2	Q01850	454 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	SLC6A3	Q01959	620 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	MS4A13	Q5J8X5	152 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	ADGRF1	Q5T601	910 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	BTBD8	Q5XKL5	378 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	HGSNAT	Q68CP4	663 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	GRAMD4	Q6IC98	578 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	CXorf57	Q6NSI4	855 aa	Known RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	CAVIN1	Q6NZI2	390 aa	Known RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	TADA2B	Q86TJ2	420 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	ZNF677	Q86XU0	584 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	NAT16	Q8N8M0	369 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	SLC30A5	Q8TAD4	765 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	NKD2	Q969F2	451 aa	Predicted RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	TTC17	Q96AE7	1141 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	SLC2A11	Q9BYW1	496 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	MIS12	Q9H081	205 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	NUCKS1	Q9H1E3	243 aa	Known RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	POPDC2	Q9HBU9	364 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	CBX8	Q9HC52	389 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	ARHGEF4	Q9NR80	690 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	PIGV	Q9NUD9	493 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	WDR35	Q9P2L0	1181 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	MED19	A0JLT2	244 aa	Predicted RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	ESPN	B1AK53	854 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	HSF2BP	O75031	334 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	KLF8	O95600	359 aa	Predicted RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	APOD	P05090	189 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	HMBS	P08397	361 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	NCAM1	P13591	858 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	TRIM21	P19474	475 aa	Known RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	CD70	P32970	193 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	CNR2	P34972	360 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	FLT3	P36888	993 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	IL12RB1	P42701	662 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	CXCR3	P49682	368 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	SEC13	P55735	322 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	TBX4	P57082	545 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	ZNF252P-AS1	Q0IIN9	211 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	PPP2R5D	Q14738	602 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	CLEC16A	Q2KHT3	1053 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	FSCB	Q5H9T9	825 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	KBTBD6	Q86V97	674 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	PHF13	Q86YI8	300 aa	Predicted RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	DEFB106A	Q8N104	65 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	ACD	Q96AP0	544 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	SERPINB11	Q96P15	392 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	BBS2	Q9BXC9	721 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	DNAI2	Q9GZS0	605 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	DNAJC17	Q9NVM6	304 aa	Known RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	USP36	Q9P275	1121 aa	Known RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	LSM7	Q9UK45	103 aa	Known RBP	4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	MYO6	Q9UM54	1294 aa		4.4	□□□□□ -1.71
POLR2B-208	ENST00000478188	COL5A1	P20908	1838 aa	Predicted RBP	4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	SART1	O43290	800 aa	Known RBP	4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	GFPT2	O94808	682 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	APBB3	O95704	486 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	TRUB2	O95900	331 aa	Known RBP	4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	PRKCI	P41743	596 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	MATK	P42679	507 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	PXN	P49023	591 aa	Predicted RBP	4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	DGKG	P49619	791 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	ATXN1	P54253	815 aa	Known RBP	4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	NRL	P54845	237 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	POLR2F	P61218	127 aa	Known RBP	4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	YWHAZ	P63104	245 aa	Known RBP	4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	SHC2	P98077	582 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	AMPD2	Q01433	879 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	DHX9	Q08211	1270 aa	Known RBP	4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	ZSCAN23	Q3MJ62	389 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	PLK5	Q496M5	336 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	DCAF6	Q58WW2	860 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	FIGN	Q5HY92	759 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	C10orf76	Q5T2E6	689 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	PMS2CL	Q68D20	193 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	LAIR1	Q6GTX8	287 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	RFWD3	Q6PCD5	774 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	TPGS1	Q6ZTW0	290 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	DGLUCY	Q7Z3D6	616 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	C14orf80	Q86SX3	495 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	ZDHHC17	Q8IUH5	632 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	DCLK2	Q8N568	766 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	GPR161	Q8N6U8	529 aa	Known RBP	4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	FRMD1	Q8N878	549 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	TXNDC5	Q8NBS9	432 aa	Known RBP	4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	IGSF8	Q969P0	613 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	PSMB7	Q99436	277 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	ORAI3	Q9BRQ5	295 aa		4.39	□□□□□ -1.71
POLR2B-208	ENST00000478188	TMPRSS4	Q9NRS4	437 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms