RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ODF2Q5BJF6 829 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 MS4A13Q5J8X5 152 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 FAM78AQ5JUQ0 283 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ARTNQ5T4W7 220 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 IER5LQ5T953 404 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 FAM72AQ5TYM5 149 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PIK3R6Q5UE93 754 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 FAM72DQ6L9T8 149 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 AADACL2Q6P093 401 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SPOCD1Q6ZMY3 1216 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 Q6ZNB5 142 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 TRIM67Q6ZTA4 783 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ANKS1BQ7Z6G8 1248 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 C14orf80Q86SX3 495 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 FAM72BQ86X60 149 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 VSIG1Q86XK7 387 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PRSS33Q8NF86 280 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 COG1Q8WTW3 980 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 TSC1Q92574 1164 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 RBM41Q96IZ5 413 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ASB16Q96NS5 453 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 MYADMQ96S97 322 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PRMT1Q99873 361 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SIK2Q9H0K1 926 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 TRPV4Q9HBA0 871 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ZNF510Q9Y2H8 683 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SH3BP1Q9Y3L3 701 aa16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 USP15Q9Y4E8 981 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP3-228ENST00000583363 GOLGA6L7A0A1B0GV03 622 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 E2F8A0AVK6 867 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 TMEM221A6NGB7 291 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 M0R296 226 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ZNF185O15231 689 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CEP104O60308 925 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PRAMEF12O95522 483 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CDKN2BP42772 138 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 HCAR3P49019 387 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ZNF135P52742 658 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 AUHQ13825 339 aaKnown RBP16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 PPP6R3Q5H9R7 873 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 NADSYN1Q6IA69 706 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ZNF683Q8IZ20 524 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 RASGEF1CQ8N431 466 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CELF5Q8N6W0 485 aaKnown RBP16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SMARCD2Q92925 531 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CWC15Q9P013 229 aaKnown RBP16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 RCOR3Q9P2K3 495 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 LSM7Q9UK45 103 aaKnown RBP16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ZFP37Q9Y6Q3 630 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 KMT2EQ8IZD2 1858 aa16.9■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ZNF487B1APH4 448 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 URI1O94763 535 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 LRIG2O94898 1065 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TACR2P21452 398 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PTPN7P35236 360 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CETN2P41208 172 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ZXDAP98168 799 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 MMRN1Q13201 1228 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TUBB2AQ13885 445 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ZNF77Q15935 545 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PPP2R5EQ16537 467 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 FAM133BQ5BKY9 247 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ANKRD20A8PQ5CZ79 823 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 DNTTIP2Q5QJE6 756 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ADGRF1Q5T601 910 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 SEL1L2Q5TEA6 688 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CREG2Q8IUH2 290 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CCDC50Q8IVM0 306 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 KIAA1958Q8N8K9 716 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RIN3Q8TB24 985 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 PBXIP1Q96AQ6 731 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 FAF2Q96CS3 445 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 MS4A14Q96JA4 679 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 LRRC3BQ96PB8 259 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 DDX50Q9BQ39 737 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ZNF670Q9BS34 389 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TUBB2BQ9BVA1 445 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 OSBPL8Q9BZF1 889 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 KIF9Q9HAQ2 790 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TTC7AQ9ULT0 858 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 EFR3BQ9Y2G0 817 aa16.89■□□□□ 0.29
CDK5RAP3-228ENST00000583363 hCG_1818297A0A087WSY0 165 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 DRGXA6NNA5 263 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 E9PAM4 449 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 H3BRJ5 948 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 EEF2KO00418 725 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 CREB3O43889 395 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 LAMP2P13473 410 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 GOT1P17174 413 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 SLC6A4P31645 630 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 GBP2P32456 591 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 HTR7P34969 479 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 ARL4AP40617 200 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 VIPR2P41587 438 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 USP4Q13107 963 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 C5orf22Q49AR2 442 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 TFDP3Q5H9I0 405 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 MANEALQ5VSG8 457 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 RAP1GAP2Q684P5 730 aa16.88■□□□□ 0.29
CDK5RAP3-228ENST00000583363 FBXL22Q6P050 247 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms