RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 FAM118BQ9BPY3 351 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 CATSPERBQ9H7T0 1116 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 PIGVQ9NUD9 493 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 GPATCH2LQ9NWQ4 482 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 ARHGEF38Q9NXL2 777 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 DTLQ9NZJ0 730 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 SAE1Q9UBE0 346 aaPredicted RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 SLC12A6Q9UHW9 1150 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 XPO7Q9UIA9 1087 aaKnown RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 TRHDEQ9UKU6 1024 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 BACE2Q9Y5Z0 518 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 CLUHO75153 1309 aa8.2□□□□□ -1.1
VMA21-203ENST00000477649 COL4A4P53420 1690 aaPredicted RBP8.2□□□□□ -1.1
VMA21-203ENST00000477649 ABHD14A-ACY1A0A1B0GW23 586 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 EXOC1LA0A1B0GW35 172 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 TLDC2A0PJX2 215 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 I3L4J1 428 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 DCLK1O15075 740 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 IRAK2O43187 625 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 TBC1D4O60343 1298 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 GFRA3O60609 400 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 PQBP1O60828 265 aaKnown RBP8.19□□□□□ -1.1
VMA21-203ENST00000477649 SHBGP04278 402 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 GOT1P17174 413 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 TFE3P19532 575 aaPredicted RBP8.19□□□□□ -1.1
VMA21-203ENST00000477649 AMPD1P23109 780 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 IGFBP6P24592 240 aaPredicted RBP8.19□□□□□ -1.1
VMA21-203ENST00000477649 RBL1P28749 1068 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 HOXC13P31276 330 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 STX2P32856 288 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 TUFMP49411 452 aaKnown RBP8.19□□□□□ -1.1
VMA21-203ENST00000477649 GDF10P55107 478 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 GNGT1P63211 74 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 GBE1Q04446 702 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 SEMA5AQ13591 1074 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 AUHQ13825 339 aaKnown RBP8.19□□□□□ -1.1
VMA21-203ENST00000477649 GPNMBQ14956 572 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 PARP6Q2NL67 630 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 PAN2Q504Q3 1202 aaKnown RBP8.19□□□□□ -1.1
VMA21-203ENST00000477649 SLC39A12Q504Y0 691 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 LGSNQ5TDP6 509 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 FAM171A1Q5VUB5 890 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 ITPRIPL1Q6GPH6 555 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 FUT10Q6P4F1 479 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 ZNF449Q6P9G9 518 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 KCNT2Q6UVM3 1135 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 HFE2Q6ZVN8 426 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 GPRIN1Q7Z2K8 1008 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 PALM2Q8IXS6 379 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 ZBED8Q8IZ13 594 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 GLIS1Q8NBF1 620 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 DQX1Q8TE96 717 aaKnown RBP8.19□□□□□ -1.1
VMA21-203ENST00000477649 HASPINQ8TF76 798 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 OVCA2Q8WZ82 227 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 RNF34Q969K3 372 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 ALKBH8Q96BT7 664 aaKnown RBP8.19□□□□□ -1.1
VMA21-203ENST00000477649 HDAC11Q96DB2 347 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 KCNK17Q96T54 332 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 TTPALQ9BTX7 342 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 FAM107BQ9H098 131 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 EPN3Q9H201 632 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 ACSS3Q9H6R3 686 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 ETNK2Q9NVF9 386 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 TMLHEQ9NVH6 421 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 IGSF9Q9P2J2 1179 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 CACNG4Q9UBN1 327 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 TLR6Q9Y2C9 796 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 PRG3Q9Y2Y8 225 aaPredicted RBP8.19□□□□□ -1.1
VMA21-203ENST00000477649 FRMPD3Q5JV73 1810 aa8.19□□□□□ -1.1
VMA21-203ENST00000477649 TDRD15B5MCY1 1934 aaKnown RBP8.19□□□□□ -1.1
VMA21-203ENST00000477649 TSC2P49815 1807 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 WASH4PA8MWX3 477 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 CREB3O43889 395 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 ITGB1P05556 798 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 GALTP07902 379 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 ETS1P14921 441 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 ERCC2P18074 760 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 YWHAQP27348 245 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 LSP1P33241 339 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 SLC11A1P49279 550 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 ALDH7A1P49419 539 aaKnown RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 ATXN1P54253 815 aaKnown RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 CACNA2D1P54289 1103 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 GYS2P54840 703 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 GEMIN4P57678 1058 aaKnown RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 CREMQ03060 361 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 RING1Q06587 406 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 PPIDQ08752 370 aaKnown RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 FAAP100Q0VG06 881 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 GALNT2Q10471 571 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 USP41Q3LFD5 358 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 RAB6CQ53S08 254 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 NUGGCQ68CJ6 796 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 TIGD7Q6NT04 549 aaPredicted RBP8.18□□□□□ -1.1
VMA21-203ENST00000477649 NPNTQ6UXI9 565 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 DENND5BQ6ZUT9 1274 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 B4GALNT4Q76KP1 1039 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 TAC4Q86UU9 113 aa8.18□□□□□ -1.1
VMA21-203ENST00000477649 SCN4BQ8IWT1 228 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms