RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 COLEC11Q9BWP8 271 aa20.76■□□□□ 0.91
USP39-204ENST00000409766 PRDM12Q9H4Q4 367 aa20.76■□□□□ 0.91
USP39-204ENST00000409766 XAB2Q9HCS7 855 aaKnown RBP20.76■□□□□ 0.91
USP39-204ENST00000409766 DMAP1Q9NPF5 467 aaPredicted RBP20.76■□□□□ 0.91
USP39-204ENST00000409766 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.76■□□□□ 0.91
USP39-204ENST00000409766 SRRDQ9UH36 339 aa20.76■□□□□ 0.91
USP39-204ENST00000409766 IKBKGQ9Y6K9 419 aa20.76■□□□□ 0.91
USP39-204ENST00000409766 F8W810 466 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 RNF103O00237 685 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 OPHN1O60890 802 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 GSTA2P09210 222 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 CKBP12277 381 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 PRKCHP24723 683 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 GRIA1P42261 906 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 HCAR3P49019 387 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 ZKSCAN8Q15776 578 aaPredicted RBP20.75■□□□□ 0.91
USP39-204ENST00000409766 DEFB115Q30KQ5 88 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 RGS9BPQ6ZS82 235 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 RTN4RL1Q86UN2 441 aaPredicted RBP20.75■□□□□ 0.91
USP39-204ENST00000409766 RGS18Q9NS28 235 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 IQANK1A0A1B0GTG1 560 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 DNM1LO00429 736 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 PPP1R12AO14974 1030 aaPredicted RBP20.75■□□□□ 0.91
USP39-204ENST00000409766 ZWINTO95229 277 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 INHBAP08476 426 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 ERCC2P18074 760 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 YY1P25490 414 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 GBP2P32456 591 aaPredicted RBP20.75■□□□□ 0.91
USP39-204ENST00000409766 CXCR3P49682 368 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 CDK16Q00536 496 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 ACTN3Q08043 901 aaPredicted RBP20.75■□□□□ 0.91
USP39-204ENST00000409766 BSPRYQ5W0U4 402 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 TRAF7Q6Q0C0 670 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 MICALL1Q8N3F8 863 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 BANPQ8N9N5 519 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 COLGALT1Q8NBJ5 622 aa20.75■□□□□ 0.91
USP39-204ENST00000409766 ALKBH8Q96BT7 664 aaKnown RBP20.75■□□□□ 0.91
USP39-204ENST00000409766 EBNA1BP2Q99848 306 aaKnown RBP20.75■□□□□ 0.91
USP39-204ENST00000409766 PATJQ8NI35 1801 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 STK10O94804 968 aaKnown RBP20.74■□□□□ 0.91
USP39-204ENST00000409766 CPP00450 1065 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 WASHC5Q12768 1159 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 MTFR1Q15390 333 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 MAPRE1Q15691 268 aaKnown RBP20.74■□□□□ 0.91
USP39-204ENST00000409766 PDK4Q16654 411 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 ARL13BQ3SXY8 428 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 CGB2Q6NT52 195 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 UNC5AQ6ZN44 842 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 SLC26A11Q86WA9 606 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 TP53INP2Q8IXH6 220 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 THEM5Q8N1Q8 247 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 MPP5Q8N3R9 675 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 CCNYQ8ND76 341 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 FERMT1Q9BQL6 677 aa20.74■□□□□ 0.91
USP39-204ENST00000409766 APOEP02649 317 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 TYMPP19971 482 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 TPI1P60174 286 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 SARNPP82979 210 aaKnown RBP20.73■□□□□ 0.91
USP39-204ENST00000409766 FAAP100Q0VG06 881 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 MBTPS1Q14703 1052 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 SPATA21Q7Z572 469 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 LRRC6Q86X45 466 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 GLT1D1Q96MS3 346 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 TRPV6Q9H1D0 765 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 WDCPQ9H6R7 721 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 ACTR5Q9H9F9 607 aaPredicted RBP20.73■□□□□ 0.91
USP39-204ENST00000409766 EIF2B3Q9NR50 452 aaKnown RBP20.73■□□□□ 0.91
USP39-204ENST00000409766 RAD54BQ9Y620 910 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 ARHGEF37A1IGU5 675 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 CXorf49A8MYA2 514 aaPredicted RBP20.73■□□□□ 0.91
USP39-204ENST00000409766 B4GALT3O60512 393 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 SUN1O94901 812 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 EOMESO95936 686 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 MT-ND3P03897 115 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 MLNP12872 115 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 LVRNQ6Q4G3 990 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 SH2D5Q6ZV89 423 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 PITPNM3Q9BZ71 974 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 PRKAG3Q9UGI9 489 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 ZNF180Q9UJW8 692 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 MAD1L1Q9Y6D9 718 aa20.73■□□□□ 0.91
USP39-204ENST00000409766 MOXD2PA6NHM9 499 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 GOLGA8RI6L899 631 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 TM9SF1O15321 606 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 TSPY1Q01534 308 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 PARP6Q2NL67 630 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 HHATQ5VTY9 493 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 SLC24A5Q71RS6 500 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 PDZD4Q76G19 769 aaPredicted RBP20.72■□□□□ 0.91
USP39-204ENST00000409766 TRPM8Q7Z2W7 1104 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 TAC4Q86UU9 113 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 ZNF567Q8N184 647 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 PPM1NQ8N819 430 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 PDCD7Q8N8D1 485 aaKnown RBP20.72■□□□□ 0.91
USP39-204ENST00000409766 TCP10LQ8TDR4 215 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 GRAMD1AQ96CP6 724 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 SERAC1Q96JX3 654 aa20.72■□□□□ 0.91
USP39-204ENST00000409766 KLF6Q99612 283 aaPredicted RBP20.72■□□□□ 0.91
USP39-204ENST00000409766 TRIM56Q9BRZ2 755 aaKnown RBP20.72■□□□□ 0.91
USP39-204ENST00000409766 CEP41Q9BYV8 373 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms