RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 CDKAL1Q5VV42 579 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 TAC4Q86UU9 113 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 SLC47A2Q86VL8 602 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 CCDC117Q8IWD4 279 aaPredicted RBP13.41□□□□□ -0.26
CHMP3-208ENST00000486404 HJURPQ8NCD3 748 aaPredicted RBP13.41□□□□□ -0.26
CHMP3-208ENST00000486404 PPP1R13BQ96KQ4 1090 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 PCMTD1Q96MG8 357 aaPredicted RBP13.41□□□□□ -0.26
CHMP3-208ENST00000486404 SLC2A11Q9BYW1 496 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 NAT10Q9H0A0 1025 aaKnown RBP13.41□□□□□ -0.26
CHMP3-208ENST00000486404 VPS16Q9H269 839 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 CACNA2D2Q9NY47 1150 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 CYTH4Q9UIA0 394 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 CDV3Q9UKY7 258 aaKnown RBP13.41□□□□□ -0.26
CHMP3-208ENST00000486404 NAALADL1Q9UQQ1 740 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 INVSQ9Y283 1065 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 TLR6Q9Y2C9 796 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 STARD13Q9Y3M8 1113 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 SDK1Q7Z5N4 2213 aa13.41□□□□□ -0.26
CHMP3-208ENST00000486404 TNRC6BQ9UPQ9 1833 aaKnown RBP13.41□□□□□ -0.26
CHMP3-208ENST00000486404 CEP250Q9BV73 2442 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 PRR5-ARHGAP8B1AHC4 643 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 FOXN3O00409 490 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-208ENST00000486404 DCLK1O15075 740 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 IRAK2O43187 625 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 MAP3K13O43283 966 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 ACSL4O60488 711 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 FOXD2O60548 495 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-208ENST00000486404 HSF2BPO75031 334 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 IGLV3-27P01718 113 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 CISD3P0C7P0 127 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 CHRM1P11229 460 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-208ENST00000486404 HNRNPLP14866 589 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHMP3-208ENST00000486404 UCHL3P15374 230 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 HOXD9P28356 352 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-208ENST00000486404 YWHAZP63104 245 aaKnown RBP13.4□□□□□ -0.26
CHMP3-208ENST00000486404 ARHGAP8P85298 464 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 CSRP2Q16527 193 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 PLK5Q496M5 336 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 TMEM110Q86TL2 294 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 FAM71AQ8IYT1 594 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 ZNF557Q8N988 423 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-208ENST00000486404 C12orf50Q8NA57 414 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-208ENST00000486404 MSANTD4Q8NCY6 345 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 ERLEC1Q96DZ1 483 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 TMA16Q96EY4 203 aaKnown RBP13.4□□□□□ -0.26
CHMP3-208ENST00000486404 CPXM1Q96SM3 734 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 ARRDC1-AS1Q9H2J1 176 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 PARD6AQ9NPB6 346 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 PLCB1Q9NQ66 1216 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 SEMA4GQ9NTN9 838 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 FANCLQ9NW38 375 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 STOML2Q9UJZ1 356 aa13.4□□□□□ -0.26
CHMP3-208ENST00000486404 SYNJ2BP-COX16A0A087WUM0 186 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 F8VZ95 297 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 NPC1O15118 1278 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 TBL1XO60907 577 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 TRUB2O95900 331 aaKnown RBP13.39□□□□□ -0.27
CHMP3-208ENST00000486404 CYP11B1P15538 503 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 CDK11BP21127 795 aaKnown RBP13.39□□□□□ -0.27
CHMP3-208ENST00000486404 SDHBP21912 280 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 CLCN1P35523 988 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 MPLP40238 635 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 CDK17Q00537 523 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 CREB5Q02930 508 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 TYRO3Q06418 890 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 GEN1Q17RS7 908 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 AASDHQ4L235 1098 aaPredicted RBP13.39□□□□□ -0.27
CHMP3-208ENST00000486404 DCAF6Q58WW2 860 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 EFHC1Q5JVL4 640 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 TAF3Q5VWG9 929 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 OR6B2Q6IFH4 312 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 RFWD3Q6PCD5 774 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 PRR23CQ6ZRP0 262 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 FAM183BPQ6ZVS7 135 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 BEND5Q7L4P6 421 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 CYP2U1Q7Z449 544 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 CHSY1Q86X52 802 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 MFN1Q8IWA4 741 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 TMEM35BQ8NCS4 154 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 WFIKKN2Q8TEU8 576 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 RNF34Q969K3 372 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 ZC3H10Q96K80 434 aaKnown RBP13.39□□□□□ -0.27
CHMP3-208ENST00000486404 FCRL2Q96LA5 508 aaPredicted RBP13.39□□□□□ -0.27
CHMP3-208ENST00000486404 ACOX2Q99424 681 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 GABRG3Q99928 467 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 IRX2Q9BZI1 471 aaPredicted RBP13.39□□□□□ -0.27
CHMP3-208ENST00000486404 LHX5Q9H2C1 402 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 FAM207AQ9NSI2 230 aaPredicted RBP13.39□□□□□ -0.27
CHMP3-208ENST00000486404 COX16Q9P0S2 106 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 CALCOCO1Q9P1Z2 691 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 TJP2Q9UDY2 1190 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 FBXO10Q9UK96 956 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 PCDHGA5Q9Y5G8 931 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 RAD54BQ9Y620 910 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 DMXL1Q9Y485 3027 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 ABCA7Q8IZY2 2146 aa13.39□□□□□ -0.27
CHMP3-208ENST00000486404 GFRA2O00451 464 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 SYNCRIPO60506 623 aaKnown RBP13.38□□□□□ -0.27
CHMP3-208ENST00000486404 DAB1O75553 588 aa13.38□□□□□ -0.27
CHMP3-208ENST00000486404 GRAP2O75791 330 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms