RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SDC3O75056 442 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 SEMA4FO95754 770 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 ANXA13P27216 316 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 POLR2BP30876 1174 aaKnown RBP14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 ST3GAL1Q11201 340 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 ORC1Q13415 861 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 SKIDA1Q1XH10 827 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 C3orf38Q5JPI3 329 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 RINT1Q6NUQ1 792 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 SLC39A4Q6P5W5 647 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 CLEC18BQ6UXF7 455 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 SKAP1Q86WV1 359 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 FAM177A1Q8N128 213 aaPredicted RBP14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 ZNF366Q8N895 744 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 CLEC18CQ8NCF0 446 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 SPATA17Q96L03 361 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 TTLL2Q9BWV7 592 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 GZF1Q9H116 711 aaPredicted RBP14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 OSBPL2Q9H1P3 480 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 EPN3Q9H201 632 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 LRRC4CQ9HCJ2 640 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 CRTAC1Q9NQ79 661 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 TMEM30AQ9NV96 361 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 SSUH2Q9Y2M2 353 aa14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.94□□□□□ -0.02
CSNK1D-213ENST00000580446 PP2D1A8MPX8 630 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 TSPAN3O60637 253 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 CSO75390 466 aaKnown RBP14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 PFKLP17858 780 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 PAX3P23760 479 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 LMO2P25791 158 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 MAGEA11P43364 429 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 WNT7BP56706 349 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 RIPPLY3P57055 190 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 ERVPABLB-1P60509 514 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 CLN3Q13286 438 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 ZNF174Q15697 407 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 GEN1Q17RS7 908 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 FOXR1Q6PIV2 292 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 CPLX2Q6PUV4 134 aaKnown RBP14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 C1orf186Q6ZWK4 172 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 FBXL16Q8N461 479 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 KIAA1958Q8N8K9 716 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 OTUB2Q96DC9 234 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 XPO6Q96QU8 1125 aaKnown RBP14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 SYT15Q9BQS2 421 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 LHX5Q9H2C1 402 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 IKZF4Q9H2S9 585 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 POLR1BQ9H9Y6 1135 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 OSGEPQ9NPF4 335 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 THSD1Q9NS62 852 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 MAGEC2Q9UBF1 373 aaPredicted RBP14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 CHORDC1Q9UHD1 332 aaPredicted RBP14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 SATB2Q9UPW6 733 aa14.93□□□□□ -0.02
CSNK1D-213ENST00000580446 SPTBN1Q01082 2364 aaKnown RBP14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 A0A0B4J269 797 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 VILLO15195 856 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 HUS1O60921 280 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 DXOO77932 396 aaKnown RBP14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 IGHV4-34P06331 123 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 EPHX1P07099 455 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 PDGFRBP09619 1106 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 PLS3P13797 630 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 XBP1P17861 261 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 PLCG1P19174 1290 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 LSSP48449 732 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 CDH8P55286 799 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 ILKQ13418 452 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 ZNF234Q14588 700 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 ARL13BQ3SXY8 428 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 LIN37Q96GY3 246 aaPredicted RBP14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 FUBP3Q96I24 572 aaKnown RBP eCLIP14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 EBF2Q9HAK2 575 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 THAP10Q9P2Z0 257 aaPredicted RBP14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 AGAP1Q9UPQ3 857 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 SNX9Q9Y5X1 595 aa14.92□□□□□ -0.02
CSNK1D-213ENST00000580446 TRIM38O00635 465 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 SIGLEC6O43699 453 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 ITGB3P05106 788 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 OR52Z1P0C646 297 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 PGFP49763 221 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 BCAT1P54687 386 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 TDRD10Q5VZ19 366 aaKnown RBP14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 HAUS3Q68CZ6 603 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 FAM171BQ6P995 826 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 SNX29Q8TEQ0 813 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 ZNF560Q96MR9 790 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 MMS19Q96T76 1030 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 NTPCRQ9BSD7 190 aaKnown RBP14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 AASDHPPTQ9NRN7 309 aa14.91□□□□□ -0.02
CSNK1D-213ENST00000580446 ANKRD63C9JTQ0 380 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 DFNA5O60443 496 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 GREM1O60565 184 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 CDC25AP30304 524 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 SMTNP53814 917 aa14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 TFAMQ00059 246 aaKnown RBP14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 MAPK8IP2Q13387 824 aaPredicted RBP14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 ZRSR1Q15695 479 aaKnown RBP14.9□□□□□ -0.02
CSNK1D-213ENST00000580446 PROX2Q3B8N5 592 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms