RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 BCLAF3A2AJT9 711 aaKnown RBP16.09■□□□□ 0.17
VTI1A-203ENST00000472892 TM4SF5O14894 197 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 LRRC63Q05C16 580 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 RAB41Q5JT25 222 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 C10orf120Q5SQS8 335 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 Q6ZNB5 142 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 NUDT18Q6ZVK8 323 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 TERB1Q8NA31 727 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 ANKRD52Q8NB46 1076 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 ERCC4Q92889 916 aaPredicted RBP16.09■□□□□ 0.17
VTI1A-203ENST00000472892 SMARCE1Q969G3 411 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 HOOK1Q9UJC3 728 aaKnown RBP16.09■□□□□ 0.17
VTI1A-203ENST00000472892 NAGPAQ9UK23 515 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 LSM7Q9UK45 103 aaKnown RBP16.09■□□□□ 0.17
VTI1A-203ENST00000472892 HCN2Q9UL51 889 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 NCOR2Q9Y618 2525 aa16.09■□□□□ 0.17
VTI1A-203ENST00000472892 MDM4O15151 490 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 TRIM24O15164 1050 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 CACNG3O60359 315 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 RALAP11233 206 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 GBP1P32455 592 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 CREB5Q02930 508 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 DCAF17Q5H9S7 520 aaPredicted RBP16.08■□□□□ 0.16
VTI1A-203ENST00000472892 TCERG1LQ5VWI1 586 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 PMS2CLQ68D20 193 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 PIGZQ86VD9 579 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 SLC35C1Q96A29 364 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 XPO6Q96QU8 1125 aaKnown RBP16.08■□□□□ 0.16
VTI1A-203ENST00000472892 CDK5RAP1Q96SZ6 601 aaKnown RBP16.08■□□□□ 0.16
VTI1A-203ENST00000472892 BBS2Q9BXC9 721 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 SMOC1Q9H4F8 434 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 ZDHHC4Q9NPG8 344 aa16.08■□□□□ 0.16
VTI1A-203ENST00000472892 ARMCX3Q9UH62 379 aaPredicted RBP16.08■□□□□ 0.16
VTI1A-203ENST00000472892 MYH10P35580 1976 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 TRIM49BA6NDI0 452 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 NEDD8-MDP1E9PL57 170 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 STC2O76061 302 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 CAVIN2O95810 425 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 TYRP14679 529 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 BCKDHBP21953 392 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 P2RY2P41231 377 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 CUL2Q13617 745 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 PPM1JQ5JR12 505 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 C10orf76Q5T2E6 689 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 PM20D1Q6GTS8 502 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 GRAMD4Q6IC98 578 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 TPGS1Q6ZTW0 290 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 TRMT11Q7Z4G4 463 aaKnown RBP16.07■□□□□ 0.16
VTI1A-203ENST00000472892 TTC30AQ86WT1 665 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 ZNF513Q8N8E2 541 aaPredicted RBP16.07■□□□□ 0.16
VTI1A-203ENST00000472892 DDX1Q92499 740 aaKnown RBP16.07■□□□□ 0.16
VTI1A-203ENST00000472892 DHTKD1Q96HY7 919 aaPredicted RBP16.07■□□□□ 0.16
VTI1A-203ENST00000472892 DNAJC17Q9NVM6 304 aaKnown RBP16.07■□□□□ 0.16
VTI1A-203ENST00000472892 FBXO10Q9UK96 956 aa16.07■□□□□ 0.16
VTI1A-203ENST00000472892 KLKB1P03952 638 aa16.06■□□□□ 0.16
VTI1A-203ENST00000472892 CISD3P0C7P0 127 aa16.06■□□□□ 0.16
VTI1A-203ENST00000472892 SLC8A3P57103 927 aa16.06■□□□□ 0.16
VTI1A-203ENST00000472892 COG7P83436 770 aa16.06■□□□□ 0.16
VTI1A-203ENST00000472892 MAP7D1Q3KQU3 841 aa16.06■□□□□ 0.16
VTI1A-203ENST00000472892 STPG1Q5TH74 334 aa16.06■□□□□ 0.16
VTI1A-203ENST00000472892 IL31Q6EBC2 164 aa16.06■□□□□ 0.16
VTI1A-203ENST00000472892 MIB1Q86YT6 1006 aa16.06■□□□□ 0.16
VTI1A-203ENST00000472892 ARHGAP18Q8N392 663 aa16.06■□□□□ 0.16
VTI1A-203ENST00000472892 RLN3Q8WXF3 142 aa16.06■□□□□ 0.16
VTI1A-203ENST00000472892 METTL14Q9HCE5 456 aaKnown RBP16.06■□□□□ 0.16
VTI1A-203ENST00000472892 ZNF510Q9Y2H8 683 aa16.06■□□□□ 0.16
VTI1A-203ENST00000472892 TCRBV21S2A2A0A5A6 115 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 PRRT4C9JH25 899 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 PSMA7O14818 248 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 PMM2O15305 246 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 ADRB1P08588 477 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 NTSR1P30989 418 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 TKTL1P51854 596 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 YWHAEP62258 255 aaKnown RBP16.05■□□□□ 0.16
VTI1A-203ENST00000472892 EFEMP1Q12805 493 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 STIM1Q13586 685 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 BYSLQ13895 437 aaKnown RBP16.05■□□□□ 0.16
VTI1A-203ENST00000472892 TCEAL6Q6IPX3 200 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 UBR7Q8N806 425 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 HMGB4Q8WW32 186 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 TCEAL3Q969E4 200 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 P2RY11Q96G91 374 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 CEP63Q96MT8 703 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 DCLK3Q9C098 648 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 BCCIPQ9P287 314 aaKnown RBP eCLIP16.05■□□□□ 0.16
VTI1A-203ENST00000472892 MAN1B1Q9UKM7 699 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 KIAA1257Q9ULG3 409 aa16.05■□□□□ 0.16
VTI1A-203ENST00000472892 ABCA7Q8IZY2 2146 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 A0A1W2PQF6 199 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 TULP2O00295 520 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 XPO1O14980 1071 aaKnown RBP16.04■□□□□ 0.16
VTI1A-203ENST00000472892 ZBED1O96006 694 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 GABRG2P18507 467 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 TBXAS1P24557 533 aaPredicted RBP16.04■□□□□ 0.16
VTI1A-203ENST00000472892 CHKAP35790 457 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 PPP1R2P41236 205 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 FMO5P49326 533 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 DGKGP49619 791 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 YWHAGP61981 247 aaKnown RBP eCLIP16.04■□□□□ 0.16
VTI1A-203ENST00000472892 PDE4CQ08493 712 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms