RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CGRRF1Q99675 332 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 KCND1Q9NSA2 647 aa12.66□□□□□ -0.38
NPLOC4-202ENST00000374747 SAC3D1A6NKF1 404 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 ONECUT3O60422 494 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 NBNO60934 754 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 TGM2P21980 687 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 AQP5P55064 265 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 EPC2Q52LR7 807 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 SGO1Q5FBB7 561 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 PLEKHA7Q6IQ23 1121 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 VSIG10LQ86VR7 867 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 SLC7A14Q8TBB6 771 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 RSPH1Q8WYR4 309 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 SH3GL1Q99961 368 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 MYH2Q9UKX2 1941 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 H3BRB1 525 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 TADA2AO75478 443 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 HOXC6P09630 235 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 FUT2Q10981 343 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 NAIF1Q69YI7 327 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 ADCK2Q7Z695 626 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 CASP10Q92851 521 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 ZCWPW1Q9H0M4 648 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 ABHD16BQ9H3Z7 469 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 TUT1Q9H6E5 874 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 FAM49BQ9NUQ9 324 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 TUBGCP4Q9UGJ1 667 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 CYBBP04839 570 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 PDGFRBP09619 1106 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 SOAT1P35610 550 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 TAF6P49848 677 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 CACNA2D1P54289 1103 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 MAPRE1Q15691 268 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 LY6KQ17RY6 165 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 WASHC2DQ5SRD0 308 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 IL31Q6EBC2 164 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 ATG4AQ8WYN0 398 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 CAMKK2Q96RR4 588 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 EIF3LQ9Y262 564 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 VPS9D1Q9Y2B5 631 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 RPS6KL1Q9Y6S9 549 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 DUSP10Q9Y6W6 482 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 MYH15Q9Y2K3 1946 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 EML1O00423 815 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 ANXA9O76027 345 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 TBX2Q13207 712 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 DCAF6Q58WW2 860 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 ARMCX4Q5H9R4 360 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 CYP4A22Q5TCH4 519 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 ARHGAP17Q68EM7 881 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 LRRC8DQ7L1W4 858 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 FBXO25Q8TCJ0 367 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 PAFAH2Q99487 392 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 SIKE1Q9BRV8 207 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 APOL5Q9BWW9 433 aa12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-202ENST00000374747 TM9SF1O15321 606 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 TIMM44O43615 452 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 SUPT7LO94864 414 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 ASMTLO95671 621 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 ITGB3P05106 788 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 CHRM3P20309 590 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 MMRN1Q13201 1228 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 FUT11Q495W5 492 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 SEL1L3Q68CR1 1132 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 PCSK9Q8NBP7 692 aaKnown RBP12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 C1orf131Q8NDD1 294 aaKnown RBP12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 DPP3Q9NY33 737 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 SLC24A2Q9UI40 661 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 DNAJC16Q9Y2G8 782 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 GPR182O15218 404 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 ADORA2AP29274 412 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 SLC12A3P55017 1021 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 HPCAP84074 193 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 CNTN2Q02246 1040 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 CYP24A1Q07973 514 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 ANGPT1Q15389 498 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 GOLGA7BQ2TAP0 167 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 CACHD1Q5VU97 1274 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 RIN3Q8TB24 985 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 DMGDHQ9UI17 866 aaKnown RBP12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 SNHG28P0DPA3 235 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 C4BPBP20851 252 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 OTUD4Q01804 1114 aaKnown RBP12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 LAMTOR4Q0VGL1 99 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 NPY5RQ15761 445 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 TMEM106CQ9BVX2 250 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 ANKZF1Q9H8Y5 726 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 DDX20Q9UHI6 824 aaKnown RBP12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 CFAP99D6REC4 459 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 SLCO1B7G3V0H7 640 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 PSMD10O75832 226 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 CNTFP26441 200 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 FAXCQ5TGI0 409 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 UBA3Q8TBC4 463 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 CTNNAL1Q9UBT7 734 aa12.64□□□□□ -0.39
NPLOC4-202ENST00000374747 SNTNA6NMZ2 147 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 FOXN3O00409 490 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms