RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 ODC1P11926 461 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 MRPS5P82675 430 aaKnown RBP17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 HIBCHQ6NVY1 386 aaPredicted RBP17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 FAM117BQ6P1L5 589 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 SLC26A9Q7LBE3 791 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 SCAMP5Q8TAC9 235 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 CCHCR1Q8TD31 782 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 GIT1Q9Y2X7 761 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 BHMG1C9JSJ3 638 aaPredicted RBP17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 XPO1O14980 1071 aaKnown RBP17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 GATMP50440 423 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 EFTUD2Q15029 972 aaKnown RBP eCLIP17.84■□□□□ 0.456e-7■■■■□ 25.9
SMARCC2-202ENST00000347471 RWDD4Q6NW29 188 aaKnown RBP17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 PAQR9Q6ZVX9 377 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 SLCO2A1Q92959 643 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 NKD2Q969F2 451 aaPredicted RBP17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 PPP1R12CQ9BZL4 782 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 LAMA2P24043 3122 aaKnown RBP17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 RASA4BC9J798 803 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 RASA4O43374 803 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 NUDT17P0C025 328 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 PCSK1P29120 753 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 LHX1P48742 406 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 CPT1BQ92523 772 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 PGBD4Q96DM1 585 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 THOC1Q96FV9 657 aaKnown RBP17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 AGAP3Q96P47 875 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 KCTD15Q96SI1 283 aaPredicted RBP17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 HNRNPABQ99729 332 aaKnown RBP17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 SMOQ99835 787 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 CALCOCO1Q9P1Z2 691 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 HCSTQ9UBK5 93 aa17.84■□□□□ 0.45
SMARCC2-202ENST00000347471 TMEM63AO94886 807 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 IVLP07476 585 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 CKBP12277 381 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 BRAFP15056 766 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 CCL23P55773 120 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 ARL4CP56559 192 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 FNBP1LQ5T0N5 605 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 RHBDF2Q6PJF5 856 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 KCNT2Q6UVM3 1135 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 C3orf62Q6ZUJ4 267 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 CYP4X1Q8N118 509 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 FBXO36Q8NEA4 188 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 HSFY1Q96LI6 401 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 PRMT1Q99873 361 aaKnown RBP17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 TSPYL1Q9H0U9 437 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 NRDE2Q9H7Z3 1164 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 KIF9Q9HAQ2 790 aa17.83■□□□□ 0.45
SMARCC2-202ENST00000347471 KIAA0100Q14667 2235 aaKnown RBP17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 A0A0U1RQF3 1178 aa17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 WARSP23381 471 aaKnown RBP17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 MSS51Q4VC12 460 aa17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 AGBL2Q5U5Z8 902 aa17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 DEFB128Q7Z7B8 93 aa17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 ZSWIM8A7E2V4 1837 aa17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 SIP14410 1827 aa17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 KCNK1O00180 336 aa17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 MATKP42679 507 aa17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 ACAP1Q15027 740 aa17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 TP53INP2Q8IXH6 220 aa17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 PPIL6Q8IXY8 311 aa17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 ZCCHC9Q8N567 271 aaKnown RBP17.83■□□□□ 0.44
SMARCC2-202ENST00000347471 TOMM70O94826 608 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 LRPAP1P30533 357 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 TSPY1Q01534 308 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 HEATR6Q6AI08 1181 aaKnown RBP17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 ARHGEF18Q6ZSZ5 1173 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 TAOK1Q7L7X3 1001 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 PQLC3Q8N755 202 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 TRIM56Q9BRZ2 755 aaKnown RBP17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 CHST12Q9NRB3 414 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 TADA2AO75478 443 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 PPP2R5DQ14738 602 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 UPP1Q16831 310 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 EFHC2Q5JST6 749 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 DENND5BQ6ZUT9 1274 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 STMN4Q9H169 189 aaPredicted RBP17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 TMLHEQ9NVH6 421 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 DRG1Q9Y295 367 aaKnown RBP17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 IKBKGQ9Y6K9 419 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 TMEM120BA0PK00 339 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 PDK2Q15119 407 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 SLC39A12Q504Y0 691 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 RNASEH2BQ5TBB1 312 aaKnown RBP17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 CYP4V2Q6ZWL3 525 aaPredicted RBP17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 NLRP14Q86W24 1093 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 SPATA2LQ8IUW3 424 aaPredicted RBP17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 CSPG4P5Q96PW8 444 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 CCT8L2Q96SF2 557 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 PIGVQ9NUD9 493 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 DNAJB4Q9UDY4 337 aa17.82■□□□□ 0.44
SMARCC2-202ENST00000347471 IL4RP24394 825 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 YWHAHQ04917 246 aaPredicted RBP17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 MORF4L2Q15014 288 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 NOMO1Q15155 1222 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 ZNF354CQ86Y25 554 aa17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 PRCCQ92733 491 aaPredicted RBP17.81■□□□□ 0.44
SMARCC2-202ENST00000347471 SCLYQ96I15 445 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms