RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 SLITRK1Q96PX8 696 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 ZBTB18Q99592 522 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 UMODL1Q5DID0 1318 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 ARHGEF37A1IGU5 675 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 NCF1BA6NI72 391 aaPredicted RBP12.43□□□□□ -0.42
ERBB2-206ENST00000578373 NCF1CA8MVU1 366 aaPredicted RBP12.43□□□□□ -0.42
ERBB2-206ENST00000578373 LIASO43766 372 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 FAM200BP0CF97 657 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 NCF1P14598 390 aaPredicted RBP12.43□□□□□ -0.42
ERBB2-206ENST00000578373 ACADSP16219 412 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 KDELR1P24390 212 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 NCALDP61601 193 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 PDAP1Q13442 181 aaKnown RBP12.43□□□□□ -0.42
ERBB2-206ENST00000578373 KCNV1Q6PIU1 500 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 WDCPQ9H6R7 721 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 MAN1C1Q9NR34 630 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 GEMIN8Q9NWZ8 242 aaKnown RBP12.43□□□□□ -0.42
ERBB2-206ENST00000578373 SLC17A7Q9P2U7 560 aa12.43□□□□□ -0.42
ERBB2-206ENST00000578373 NCANO14594 1321 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 FSCN2O14926 492 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 GLRA3O75311 464 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 ERVK-10P10266 1014 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 GRAMD4Q6IC98 578 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 YTHDF3Q7Z739 585 aaKnown RBP12.42□□□□□ -0.42
ERBB2-206ENST00000578373 SLFN11Q7Z7L1 901 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 VSIG10LQ86VR7 867 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 KATNAL2Q8IYT4 538 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 C12orf29Q8N999 325 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 RNF217Q8TC41 542 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 CATSPER2Q96P56 530 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 HAUS8Q9BT25 410 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 ZNF518BQ9C0D4 1074 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 CACYBPQ9HB71 228 aaKnown RBP12.42□□□□□ -0.42
ERBB2-206ENST00000578373 B4GALT5O43286 388 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 MSX2P35548 267 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-206ENST00000578373 PKNOX1P55347 436 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 BRSK2Q8IWQ3 736 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 UNC45BQ8IWX7 931 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 JOSD2Q8TAC2 188 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 BLOC1S5Q8TDH9 187 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 GIPC2Q8TF65 315 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 PAPOLBQ9NRJ5 636 aaKnown RBP12.42□□□□□ -0.42
ERBB2-206ENST00000578373 TAGLN3Q9UI15 199 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 ANKRD26Q9UPS8 1709 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 C3P01024 1663 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 A0A0B4J269 797 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 SYNDIG1LA6NDD5 238 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 TAF6P49848 677 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 DRG2P55039 364 aaKnown RBP12.42□□□□□ -0.42
ERBB2-206ENST00000578373 NOMO3P69849 1222 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 IRX1P78414 480 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-206ENST00000578373 PREPLQ4J6C6 727 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-206ENST00000578373 SPATA2LQ8IUW3 424 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-206ENST00000578373 FITM2Q8N6M3 262 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 EIF1ADQ8N9N8 165 aaKnown RBP12.42□□□□□ -0.42
ERBB2-206ENST00000578373 ZSCAN18Q8TBC5 510 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-206ENST00000578373 RNPEPL1Q9HAU8 725 aa12.42□□□□□ -0.42
ERBB2-206ENST00000578373 UTP6Q9NYH9 597 aaKnown RBP12.42□□□□□ -0.42
ERBB2-206ENST00000578373 MAGEA13PA6NCF6 341 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 PHGDHO43175 533 aaKnown RBP12.41□□□□□ -0.42
ERBB2-206ENST00000578373 PEX1O43933 1283 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 LCA5LO95447 670 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 LSM8O95777 96 aaKnown RBP12.41□□□□□ -0.42
ERBB2-206ENST00000578373 CCNE2O96020 404 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 BST1Q10588 318 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 DYNC1I2Q13409 638 aaKnown RBP12.41□□□□□ -0.42
ERBB2-206ENST00000578373 CSHL1Q14406 222 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 UGP2Q16851 508 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 ZACNQ401N2 412 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 ZC3H12AQ5D1E8 599 aaKnown RBP12.41□□□□□ -0.42
ERBB2-206ENST00000578373 SPDYAQ5MJ70 313 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 SHCBP1Q8NEM2 672 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 CNDP1Q96KN2 507 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 ABI2Q9NYB9 513 aaPredicted RBP12.41□□□□□ -0.42
ERBB2-206ENST00000578373 RIPK3Q9Y572 518 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 PIK3C2AO00443 1686 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 SNHG28P0DPA3 235 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 MARSP56192 900 aaKnown RBP12.41□□□□□ -0.42
ERBB2-206ENST00000578373 MPP3Q13368 585 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 EEF1DP3Q658K8 133 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 PDPK2PQ6A1A2 396 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 CLEC4FQ8N1N0 589 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 BSNDQ8WZ55 320 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 P2RX7Q99572 595 aaKnown RBP12.41□□□□□ -0.42
ERBB2-206ENST00000578373 TRIM15Q9C019 465 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 PRDM5Q9NQX1 630 aaPredicted RBP12.41□□□□□ -0.42
ERBB2-206ENST00000578373 TJP2Q9UDY2 1190 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 SMAPO00193 183 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 TM9SF1O15321 606 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 TBL3Q12788 808 aaKnown RBP12.41□□□□□ -0.42
ERBB2-206ENST00000578373 FAM83EQ2M2I3 478 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 ASTE1Q2TB18 679 aaPredicted RBP12.41□□□□□ -0.42
ERBB2-206ENST00000578373 NBPF20Q3BBV1 942 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 HYIQ5T013 277 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 ARHGAP18Q8N392 663 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 VPS33BQ9H267 617 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 LRRC4CQ9HCJ2 640 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 LATS2Q9NRM7 1088 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 FAM155BO75949 473 aa12.41□□□□□ -0.42
ERBB2-206ENST00000578373 NFICP08651 508 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms