RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 FAM20AQ96MK3 541 aa22.58■■□□□ 1.2
CLDND1-202ENST00000394180 PRPF18Q99633 342 aaKnown RBP22.58■■□□□ 1.2
CLDND1-202ENST00000394180 FARP1Q9Y4F1 1045 aaPredicted RBP22.58■■□□□ 1.2
CLDND1-202ENST00000394180 GPC6Q9Y625 555 aaPredicted RBP22.58■■□□□ 1.2
CLDND1-202ENST00000394180 SNCAIPQ9Y6H5 919 aa22.58■■□□□ 1.2
CLDND1-202ENST00000394180 RBBP6Q7Z6E9 1792 aaKnown RBP22.58■■□□□ 1.2
CLDND1-202ENST00000394180 SNNO75324 88 aaPredicted RBP22.57■■□□□ 1.2
CLDND1-202ENST00000394180 THRAP10827 490 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 PTPN7P35236 360 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 PSMC6P62333 389 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 MOB2Q70IA6 237 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 NKD2Q969F2 451 aaPredicted RBP22.57■■□□□ 1.2
CLDND1-202ENST00000394180 UNKQ9C0B0 810 aaKnown RBP22.57■■□□□ 1.2
CLDND1-202ENST00000394180 CCDC68Q9H2F9 335 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 DHX33Q9H6R0 707 aaKnown RBP22.57■■□□□ 1.2
CLDND1-202ENST00000394180 CYP26A1O43174 497 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 ESRRBO95718 433 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 ITGAVP06756 1048 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 GLRA2P23416 452 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 TMED10P49755 219 aaKnown RBP22.57■■□□□ 1.2
CLDND1-202ENST00000394180 GPS1Q13098 491 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 ARCQ7LC44 396 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 C12orf56Q8IXR9 622 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.57■■□□□ 1.2
CLDND1-202ENST00000394180 EFHD2Q96C19 240 aaPredicted RBP22.57■■□□□ 1.2
CLDND1-202ENST00000394180 CMTM5Q96DZ9 223 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 NMRK2Q9NPI5 230 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 KCND2Q9NZV8 630 aa22.57■■□□□ 1.2
CLDND1-202ENST00000394180 C2orf71A6NGG8 1288 aa22.56■■□□□ 1.2
CLDND1-202ENST00000394180 E5RJQ4 531 aa22.56■■□□□ 1.2
CLDND1-202ENST00000394180 ATP6V1B1P15313 513 aa22.56■■□□□ 1.2
CLDND1-202ENST00000394180 CYP11B1P15538 503 aa22.56■■□□□ 1.2
CLDND1-202ENST00000394180 TFDP1Q14186 410 aa22.56■■□□□ 1.2
CLDND1-202ENST00000394180 TEX44Q53QW1 395 aa22.56■■□□□ 1.2
CLDND1-202ENST00000394180 DEPDC1Q5TB30 811 aa22.56■■□□□ 1.2
CLDND1-202ENST00000394180 ZNF720Q7Z2F6 126 aa22.56■■□□□ 1.2
CLDND1-202ENST00000394180 ARID3BQ8IVW6 561 aaPredicted RBP22.56■■□□□ 1.2
CLDND1-202ENST00000394180 PARVGQ9HBI0 331 aa22.56■■□□□ 1.2
CLDND1-202ENST00000394180 CHORDC1Q9UHD1 332 aaPredicted RBP22.56■■□□□ 1.2
CLDND1-202ENST00000394180 RABGAP1Q9Y3P9 1069 aa22.56■■□□□ 1.2
CLDND1-202ENST00000394180 ADCY6O43306 1168 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 C6orf222P0C671 652 aaPredicted RBP22.55■■□□□ 1.2
CLDND1-202ENST00000394180 AQP5P55064 265 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 BST1Q10588 318 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 GPATCH4Q5T3I0 446 aaKnown RBP22.55■■□□□ 1.2
CLDND1-202ENST00000394180 LPCAT2Q7L5N7 544 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 RCOR2Q8IZ40 523 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 SLC44A1Q8WWI5 657 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 FRMD8P1Q9BZ68 369 aaPredicted RBP22.55■■□□□ 1.2
CLDND1-202ENST00000394180 RBP3P10745 1247 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 ADGRE1Q14246 886 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 C16orf72Q14CZ0 275 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 RINT1Q6NUQ1 792 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 ELMSAN1Q6PJG2 1045 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 DCDC5Q6ZRR9 648 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 PPIL6Q8IXY8 311 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 ADGRF4Q8IZF3 695 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 TSPAN14Q8NG11 270 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 HM13Q8TCT9 377 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 CHPT1Q8WUD6 406 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 DCAF4Q8WV16 495 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 EMSYQ7Z589 1322 aa22.55■■□□□ 1.2
CLDND1-202ENST00000394180 PTPRAP18433 802 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 ENTPD1P49961 510 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 NEK2P51955 445 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 AP3B2Q13367 1082 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 UBE2SQ16763 222 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 NSMFQ6X4W1 530 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 DDHD1Q8NEL9 900 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 DDX1Q92499 740 aaKnown RBP22.54■■□□□ 1.2
CLDND1-202ENST00000394180 EME1Q96AY2 570 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 ACAP3Q96P50 834 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 RANBP9Q96S59 729 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 PSTPIP2Q9H939 334 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 ALG13Q9NP73 1137 aaKnown RBP22.54■■□□□ 1.2
CLDND1-202ENST00000394180 PLLPQ9Y342 182 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 BMP10O95393 424 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 COL6A2P12110 1019 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 TXNL4AP83876 142 aaKnown RBP22.54■■□□□ 1.2
CLDND1-202ENST00000394180 SLC25A3Q00325 362 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 MCOLN2Q8IZK6 566 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 TERB1Q8NA31 727 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 GMCL1Q96IK5 515 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 NEURL2Q9BR09 285 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 SELENONQ9NZV5 590 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 PRPF19Q9UMS4 504 aaKnown RBP22.54■■□□□ 1.2
CLDND1-202ENST00000394180 NUB1Q9Y5A7 615 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 IKBKGQ9Y6K9 419 aa22.54■■□□□ 1.2
CLDND1-202ENST00000394180 USP17L10C9JJH3 530 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 COPEO14579 308 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 SLITRK3O94933 977 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 OCM2P0CE71 109 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 OCMP0CE72 109 aaPredicted RBP22.53■■□□□ 1.2
CLDND1-202ENST00000394180 GSTT2P0CG29 244 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 GSTT2BP0CG30 244 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 BMP3P12645 472 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 L1CAMP32004 1257 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 VAMP7P51809 220 aa22.53■■□□□ 1.2
CLDND1-202ENST00000394180 ALDH18A1P54886 795 aaKnown RBP22.53■■□□□ 1.2
CLDND1-202ENST00000394180 TMPRSS15P98073 1019 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms