RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W YOR034C-AQ3E735 80 aa0.98□□□□□ -2.25
VPS16YPL045W Q0032Q9ZZX7 96 aa0.98□□□□□ -2.25
VPS16YPL045W NHP2P32495 156 aaPredicted RBP0.97□□□□□ -2.25
VPS16YPL045W PAI3P01094 68 aa0.97□□□□□ -2.25
VPS16YPL045W YBR230W-AQ3E762 66 aa0.97□□□□□ -2.25
VPS16YPL045W YNL042W-BQ3E7Z2 85 aa0.97□□□□□ -2.25
VPS16YPL045W YIL102C-AQ2V2P5 75 aa0.96□□□□□ -2.26
VPS16YPL045W YGR121W-AQ3E816 71 aa0.96□□□□□ -2.26
VPS16YPL045W DDR2P89113 61 aa0.95□□□□□ -2.26
VPS16YPL045W YJL127C-BQ3E828 52 aa0.95□□□□□ -2.26
VPS16YPL045W YNL198CP40166 100 aa0.94□□□□□ -2.26
VPS16YPL045W RPL37BP51402 88 aaKnown RBP0.94□□□□□ -2.26
VPS16YPL045W BSC4P53841 131 aa0.93□□□□□ -2.26
VPS16YPL045W YDR010CQ12426 110 aa0.93□□□□□ -2.26
VPS16YPL045W ATP18P81450 59 aa0.93□□□□□ -2.26
VPS16YPL045W YJR107C-AP0CT86 78 aa0.92□□□□□ -2.26
VPS16YPL045W YCR085WP25650 117 aa0.92□□□□□ -2.26
VPS16YPL045W RPA12P32529 125 aaKnown RBP0.92□□□□□ -2.26
VPS16YPL045W YFR009W-AP0C5M9 85 aa0.91□□□□□ -2.26
VPS16YPL045W YBR072C-AQ3E794 53 aa0.91□□□□□ -2.26
VPS16YPL045W YLR157W-EP0CF00 54 aa0.91□□□□□ -2.26
VPS16YPL045W YLR157W-DP0CE99 70 aa0.9□□□□□ -2.27
VPS16YPL045W YJL133C-AQ3E7A3 74 aa0.9□□□□□ -2.27
VPS16YPL045W YOL097W-AQ3E7Y9 61 aa0.9□□□□□ -2.27
VPS16YPL045W YDR381C-AQ3E6R5 114 aa0.9□□□□□ -2.27
VPS16YPL045W YER188C-AP0C0V2 99 aa0.89□□□□□ -2.27
VPS16YPL045W COX7P10174 60 aa0.88□□□□□ -2.27
VPS16YPL045W ATX1P38636 73 aa0.88□□□□□ -2.27
VPS16YPL045W YHR073W-AP0C5N7 58 aa0.88□□□□□ -2.27
VPS16YPL045W EDC1P53080 175 aaPredicted RBP0.88□□□□□ -2.27
VPS16YPL045W TOM6P33448 61 aa0.86□□□□□ -2.27
VPS16YPL045W RPL38P49167 78 aaKnown RBP0.86□□□□□ -2.27
VPS16YPL045W YBR201C-AQ2V2Q3 67 aa0.86□□□□□ -2.27
VPS16YPL045W YSY6P38374 65 aa0.86□□□□□ -2.27
VPS16YPL045W YFL041W-AQ3E817 63 aa0.85□□□□□ -2.27
VPS16YPL045W NOP10Q6Q547 58 aaPredicted RBP0.85□□□□□ -2.27
VPS16YPL045W YIL156W-BQ2V2P4 73 aa0.84□□□□□ -2.27
VPS16YPL045W YOR316C-AQ3E806 69 aa0.83□□□□□ -2.28
VPS16YPL045W Q0017Q9ZZX8 53 aa0.83□□□□□ -2.28
VPS16YPL045W YOR314WQ12506 109 aa0.83□□□□□ -2.28
VPS16YPL045W YOL164W-AQ3E7A5 60 aa0.83□□□□□ -2.28
VPS16YPL045W YKL065W-AQ2V2P2 73 aa0.82□□□□□ -2.28
VPS16YPL045W YDR119W-AQ2V2P9 66 aa0.81□□□□□ -2.28
VPS16YPL045W YDR246W-AQ3E763 66 aa0.81□□□□□ -2.28
VPS16YPL045W YDR182W-AQ3E796 67 aa0.81□□□□□ -2.28
VPS16YPL045W YGR146C-AQ8TGT9 53 aa0.81□□□□□ -2.28
VPS16YPL045W YOL166W-AQ8TGJ1 51 aa0.8□□□□□ -2.28
VPS16YPL045W YBR016WP38216 128 aa0.79□□□□□ -2.28
VPS16YPL045W OLI1P61829 76 aa0.78□□□□□ -2.28
VPS16YPL045W SDH6Q3E785 79 aa0.77□□□□□ -2.29
VPS16YPL045W YML054C-AQ3E809 52 aa0.77□□□□□ -2.29
VPS16YPL045W RPS30AP0CX33 63 aaKnown RBP0.76□□□□□ -2.29
VPS16YPL045W RPS30BP0CX34 63 aaKnown RBP0.76□□□□□ -2.29
VPS16YPL045W YMR001C-AQ8TGS9 76 aa0.75□□□□□ -2.29
VPS16YPL045W HUB1Q6Q546 73 aa0.74□□□□□ -2.29
VPS16YPL045W YBL044WP38194 122 aa0.72□□□□□ -2.29
VPS16YPL045W ATP17Q06405 101 aa0.71□□□□□ -2.3
VPS16YPL045W YOR394C-AQ8TGJ0 55 aa0.71□□□□□ -2.3
VPS16YPL045W RPS29BP41058 56 aaKnown RBP0.71□□□□□ -2.3
VPS16YPL045W RPS29AP41057 56 aaKnown RBP0.68□□□□□ -2.3
VPS16YPL045W YCR108CQ3E819 63 aa0.65□□□□□ -2.3
VPS16YPL045W YOR072W-BQ3E832 53 aa0.65□□□□□ -2.3
VPS16YPL045W YHR050W-AQ05451 56 aa0.55□□□□□ -2.32
Retrieved 63 of 5,963 RNA–protein pairs in 4.1 ms