RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W YOR316C-AQ3E806 69 aa2.61□□□□□ -1.99
CBF5YLR175W YIR021W-AQ3E739 70 aa2.6□□□□□ -1.99
CBF5YLR175W YDR182W-AQ3E796 67 aa2.6□□□□□ -1.99
CBF5YLR175W YOL166W-AQ8TGJ1 51 aa2.6□□□□□ -1.99
CBF5YLR175W TOM6P33448 61 aa2.58□□□□□ -2
CBF5YLR175W YIL102CP40488 101 aa2.58□□□□□ -2
CBF5YLR175W AIM4P38305 123 aaPredicted RBP2.58□□□□□ -2
CBF5YLR175W RPL37BP51402 88 aaKnown RBP2.58□□□□□ -2
CBF5YLR175W YJR128WP47162 119 aa2.57□□□□□ -2
CBF5YLR175W YHR125WP38831 101 aa2.56□□□□□ -2
CBF5YLR175W YBL008W-AQ3E821 79 aa2.56□□□□□ -2
CBF5YLR175W YLR255CO13574 117 aa2.55□□□□□ -2
CBF5YLR175W YGR146C-AQ8TGT9 53 aa2.55□□□□□ -2
CBF5YLR175W YAL067W-AQ8TGK6 75 aa2.54□□□□□ -2
CBF5YLR175W COX8P04039 78 aa2.52□□□□□ -2.01
CBF5YLR175W YKL065W-AQ2V2P2 73 aa2.52□□□□□ -2.01
CBF5YLR175W YBR016WP38216 128 aa2.51□□□□□ -2.01
CBF5YLR175W YJL144WP47009 104 aa2.51□□□□□ -2.01
CBF5YLR175W Q0017Q9ZZX8 53 aa2.5□□□□□ -2.01
CBF5YLR175W YGL034CP53186 121 aa2.49□□□□□ -2.01
CBF5YLR175W FYV12Q08559 129 aa2.49□□□□□ -2.01
CBF5YLR175W YFR032C-BQ8TGU2 87 aa2.49□□□□□ -2.01
CBF5YLR175W RPS30AP0CX33 63 aaKnown RBP2.48□□□□□ -2.01
CBF5YLR175W RPS30BP0CX34 63 aaKnown RBP2.48□□□□□ -2.01
CBF5YLR175W SDH6Q3E785 79 aa2.48□□□□□ -2.01
CBF5YLR175W OLI1P61829 76 aa2.45□□□□□ -2.02
CBF5YLR175W YIL156W-BQ2V2P4 73 aa2.45□□□□□ -2.02
CBF5YLR175W SBH1P52870 82 aa2.44□□□□□ -2.02
CBF5YLR175W YLR412C-AQ3E742 68 aa2.44□□□□□ -2.02
CBF5YLR175W YMR001C-AQ8TGS9 76 aa2.44□□□□□ -2.02
CBF5YLR175W OST5Q92316 86 aa2.44□□□□□ -2.02
CBF5YLR175W YBR201C-AQ2V2Q3 67 aa2.43□□□□□ -2.02
CBF5YLR175W MRX7P53869 86 aa2.42□□□□□ -2.02
CBF5YLR175W HUB1Q6Q546 73 aa2.42□□□□□ -2.02
CBF5YLR175W YJL009WP47078 108 aa2.4□□□□□ -2.02
CBF5YLR175W YNL277W-AQ3E7Z0 62 aa2.39□□□□□ -2.03
CBF5YLR175W YDR210WQ03482 75 aa2.37□□□□□ -2.03
CBF5YLR175W YOR381W-AQ3E804 55 aa2.35□□□□□ -2.03
CBF5YLR175W YML054C-AQ3E809 52 aa2.34□□□□□ -2.03
CBF5YLR175W YMR122CQ03879 124 aa2.33□□□□□ -2.04
CBF5YLR175W YHR032W-AP0C5N6 59 aa2.33□□□□□ -2.04
CBF5YLR175W YBL044WP38194 122 aa2.32□□□□□ -2.04
CBF5YLR175W YER188C-AP0C0V2 99 aa2.31□□□□□ -2.04
CBF5YLR175W YML100W-AQ8TGT0 57 aa2.28□□□□□ -2.04
CBF5YLR175W YCR095W-AQ3E787 52 aa2.26□□□□□ -2.05
CBF5YLR175W YOR394C-AQ8TGJ0 55 aa2.26□□□□□ -2.05
CBF5YLR175W ATP17Q06405 101 aa2.25□□□□□ -2.05
CBF5YLR175W YOR376W-AQ3E805 51 aa2.19□□□□□ -2.06
CBF5YLR175W RPL37AP49166 88 aaKnown RBP2.18□□□□□ -2.06
CBF5YLR175W YCR108CQ3E819 63 aa2.17□□□□□ -2.06
CBF5YLR175W YEL014CP39999 101 aa2.14□□□□□ -2.07
CBF5YLR175W QCR10P37299 77 aa2.1□□□□□ -2.07
CBF5YLR175W YOR072W-BQ3E832 53 aa2.08□□□□□ -2.08
CBF5YLR175W RPS29BP41058 56 aaKnown RBP2.06□□□□□ -2.08
CBF5YLR175W SOM1Q05676 74 aa2.06□□□□□ -2.08
CBF5YLR175W YGL014C-AP0C5N1 53 aa2.05□□□□□ -2.08
CBF5YLR175W RPS29AP41057 56 aaKnown RBP2□□□□□ -2.09
CBF5YLR175W YHR086W-AQ3E746 53 aa1.99□□□□□ -2.09
CBF5YLR175W HHY1P39982 102 aa1.94□□□□□ -2.1
CBF5YLR175W YBR072C-AQ3E794 53 aa1.92□□□□□ -2.1
CBF5YLR175W YHR050W-AQ05451 56 aa1.7□□□□□ -2.14
CBF5YLR175W YOL164W-AQ3E7A5 60 aa1.45□□□□□ -2.18
CBF5YLR175W YLR157W-EP0CF00 54 aa1.35□□□□□ -2.19
Retrieved 63 of 5,963 RNA–protein pairs in 37.2 ms