RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W YHR213W-BQ8TGK1 99 aa2.45□□□□□ -2.02
LDB18YLL049W YLR361C-AQ3E795 98 aa2.44□□□□□ -2.02
LDB18YLL049W YDR246W-AQ3E763 66 aa2.43□□□□□ -2.02
LDB18YLL049W YJL133C-AQ3E7A3 74 aa2.43□□□□□ -2.02
LDB18YLL049W YCR050CP25630 102 aa2.42□□□□□ -2.02
LDB18YLL049W TOM6P33448 61 aa2.42□□□□□ -2.02
LDB18YLL049W YOR304C-AO14468 76 aa2.41□□□□□ -2.02
LDB18YLL049W YLR162WQ06235 118 aa2.41□□□□□ -2.02
LDB18YLL049W YER187WP40102 141 aa2.4□□□□□ -2.03
LDB18YLL049W MIC10Q96VH5 97 aa2.4□□□□□ -2.03
LDB18YLL049W YOR381W-AQ3E804 55 aa2.39□□□□□ -2.03
LDB18YLL049W NOP10Q6Q547 58 aaPredicted RBP2.39□□□□□ -2.03
LDB18YLL049W YOR314WQ12506 109 aa2.38□□□□□ -2.03
LDB18YLL049W YIR021W-AQ3E739 70 aa2.38□□□□□ -2.03
LDB18YLL049W YHR086W-AQ3E746 53 aa2.37□□□□□ -2.03
LDB18YLL049W AIM4P38305 123 aaPredicted RBP2.36□□□□□ -2.03
LDB18YLL049W LIP1Q03579 150 aa2.36□□□□□ -2.03
LDB18YLL049W YDR182W-AQ3E796 67 aa2.36□□□□□ -2.03
LDB18YLL049W YOL166W-AQ8TGJ1 51 aa2.36□□□□□ -2.03
LDB18YLL049W COX8P04039 78 aa2.34□□□□□ -2.03
LDB18YLL049W YOL013W-AP0C272 63 aaPredicted RBP2.34□□□□□ -2.03
LDB18YLL049W YHR073W-AP0C5N7 58 aa2.34□□□□□ -2.03
LDB18YLL049W YAR064WP39563 99 aa2.34□□□□□ -2.03
LDB18YLL049W RPL36AP05745 100 aaPredicted RBP2.33□□□□□ -2.04
LDB18YLL049W YGR164WP53291 111 aa2.31□□□□□ -2.04
LDB18YLL049W YIL102CP40488 101 aa2.3□□□□□ -2.04
LDB18YLL049W YBR016WP38216 128 aa2.29□□□□□ -2.04
LDB18YLL049W YPR153WQ06537 140 aa2.29□□□□□ -2.04
LDB18YLL049W RPS30AP0CX33 63 aaKnown RBP2.27□□□□□ -2.05
LDB18YLL049W RPS30BP0CX34 63 aaKnown RBP2.27□□□□□ -2.05
LDB18YLL049W YNL277W-AQ3E7Z0 62 aa2.25□□□□□ -2.05
LDB18YLL049W YOR316C-AQ3E806 69 aa2.24□□□□□ -2.05
LDB18YLL049W SDH6Q3E785 79 aa2.22□□□□□ -2.05
LDB18YLL049W YLR255CO13574 117 aa2.21□□□□□ -2.06
LDB18YLL049W YGR146C-AQ8TGT9 53 aa2.21□□□□□ -2.06
LDB18YLL049W RPL37AP49166 88 aaKnown RBP2.2□□□□□ -2.06
LDB18YLL049W YMR001C-AQ8TGS9 76 aa2.2□□□□□ -2.06
LDB18YLL049W YMR122CQ03879 124 aa2.19□□□□□ -2.06
LDB18YLL049W YKL065W-AQ2V2P2 73 aa2.19□□□□□ -2.06
LDB18YLL049W HUB1Q6Q546 73 aa2.18□□□□□ -2.06
LDB18YLL049W OST5Q92316 86 aa2.16□□□□□ -2.06
LDB18YLL049W YER188C-AP0C0V2 99 aa2.15□□□□□ -2.07
LDB18YLL049W YML054C-AQ3E809 52 aa2.15□□□□□ -2.07
LDB18YLL049W YEL014CP39999 101 aa2.14□□□□□ -2.07
LDB18YLL049W YOR376W-AQ3E805 51 aa2.14□□□□□ -2.07
LDB18YLL049W SOM1Q05676 74 aa2.13□□□□□ -2.07
LDB18YLL049W YBR201C-AQ2V2Q3 67 aa2.12□□□□□ -2.07
LDB18YLL049W QCR10P37299 77 aa2.11□□□□□ -2.07
LDB18YLL049W MRX7P53869 86 aa2.1□□□□□ -2.07
LDB18YLL049W OLI1P61829 76 aa2.1□□□□□ -2.07
LDB18YLL049W YCR095W-AQ3E787 52 aa2.1□□□□□ -2.07
LDB18YLL049W YIL156W-BQ2V2P4 73 aa2.09□□□□□ -2.07
LDB18YLL049W ATP17Q06405 101 aa2.06□□□□□ -2.08
LDB18YLL049W YBL044WP38194 122 aa2.02□□□□□ -2.09
LDB18YLL049W YGL014C-AP0C5N1 53 aa1.97□□□□□ -2.09
LDB18YLL049W YOR394C-AQ8TGJ0 55 aa1.96□□□□□ -2.1
LDB18YLL049W YCR108CQ3E819 63 aa1.95□□□□□ -2.1
LDB18YLL049W YOR072W-BQ3E832 53 aa1.8□□□□□ -2.12
LDB18YLL049W HHY1P39982 102 aa1.73□□□□□ -2.13
LDB18YLL049W YBR072C-AQ3E794 53 aa1.72□□□□□ -2.13
LDB18YLL049W YHR050W-AQ05451 56 aa1.46□□□□□ -2.18
LDB18YLL049W YLR157W-EP0CF00 54 aa1.44□□□□□ -2.18
LDB18YLL049W YOL164W-AQ3E7A5 60 aa1.33□□□□□ -2.2
Retrieved 63 of 5,963 RNA–protein pairs in 32.7 ms