RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C RPS28AQ3E7X9 67 aaPredicted RBP5.83□□□□□ -1.48
SHB17YKR043C RPS30AP0CX33 63 aaKnown RBP5.81□□□□□ -1.48
SHB17YKR043C RPS30BP0CX34 63 aaKnown RBP5.81□□□□□ -1.48
SHB17YKR043C YOL013W-AP0C272 63 aaPredicted RBP5.8□□□□□ -1.48
SHB17YKR043C YAR064WP39563 99 aa5.78□□□□□ -1.48
SHB17YKR043C YKL065W-AQ2V2P2 73 aa5.76□□□□□ -1.49
SHB17YKR043C YOR381W-AQ3E804 55 aa5.74□□□□□ -1.49
SHB17YKR043C YHR073W-AP0C5N7 58 aa5.71□□□□□ -1.5
SHB17YKR043C YDL012CQ12489 107 aa5.7□□□□□ -1.5
SHB17YKR043C YMR122CQ03879 124 aa5.69□□□□□ -1.5
SHB17YKR043C YHR125WP38831 101 aa5.68□□□□□ -1.5
SHB17YKR043C SDH6Q3E785 79 aa5.68□□□□□ -1.5
SHB17YKR043C HUB1Q6Q546 73 aa5.68□□□□□ -1.5
SHB17YKR043C YPR153WQ06537 140 aa5.66□□□□□ -1.5
SHB17YKR043C OST5Q92316 86 aa5.63□□□□□ -1.51
SHB17YKR043C HHF1P02309 103 aaKnown RBP5.62□□□□□ -1.51
SHB17YKR043C YER188C-AP0C0V2 99 aa5.62□□□□□ -1.51
SHB17YKR043C YNL277W-AQ3E7Z0 62 aa5.61□□□□□ -1.51
SHB17YKR043C YMR001C-AQ8TGS9 76 aa5.61□□□□□ -1.51
SHB17YKR043C YOR316C-AQ3E806 69 aa5.57□□□□□ -1.52
SHB17YKR043C YFR032C-BQ8TGU2 87 aa5.52□□□□□ -1.53
SHB17YKR043C YCR095W-AQ3E787 52 aa5.51□□□□□ -1.53
SHB17YKR043C FYV12Q08559 129 aa5.5□□□□□ -1.53
SHB17YKR043C Q0017Q9ZZX8 53 aa5.48□□□□□ -1.53
SHB17YKR043C YJR128WP47162 119 aa5.47□□□□□ -1.53
SHB17YKR043C YJL144WP47009 104 aa5.45□□□□□ -1.54
SHB17YKR043C YGR146C-AQ8TGT9 53 aa5.45□□□□□ -1.54
SHB17YKR043C YLR255CO13574 117 aa5.43□□□□□ -1.54
SHB17YKR043C COX8P04039 78 aa5.39□□□□□ -1.55
SHB17YKR043C ATP17Q06405 101 aa5.39□□□□□ -1.55
SHB17YKR043C YBR201C-AQ2V2Q3 67 aa5.38□□□□□ -1.55
SHB17YKR043C YJL009WP47078 108 aa5.36□□□□□ -1.55
SHB17YKR043C YBL008W-AQ3E821 79 aa5.35□□□□□ -1.55
SHB17YKR043C YIL156W-BQ2V2P4 73 aa5.32□□□□□ -1.56
SHB17YKR043C YDR210WQ03482 75 aa5.29□□□□□ -1.56
SHB17YKR043C YBR016WP38216 128 aa5.28□□□□□ -1.56
SHB17YKR043C MRX7P53869 86 aa5.28□□□□□ -1.56
SHB17YKR043C OLI1P61829 76 aa5.27□□□□□ -1.57
SHB17YKR043C YML100W-AQ8TGT0 57 aa5.27□□□□□ -1.57
SHB17YKR043C YGL034CP53186 121 aa5.26□□□□□ -1.57
SHB17YKR043C YOR376W-AQ3E805 51 aa5.23□□□□□ -1.57
SHB17YKR043C YML054C-AQ3E809 52 aa5.03□□□□□ -1.6
SHB17YKR043C YGL014C-AP0C5N1 53 aa5.02□□□□□ -1.61
SHB17YKR043C YEL014CP39999 101 aa5.01□□□□□ -1.61
SHB17YKR043C QCR10P37299 77 aa5□□□□□ -1.61
SHB17YKR043C YBL044WP38194 122 aa4.98□□□□□ -1.61
SHB17YKR043C YCR108CQ3E819 63 aa4.92□□□□□ -1.62
SHB17YKR043C YOR394C-AQ8TGJ0 55 aa4.91□□□□□ -1.62
SHB17YKR043C SOM1Q05676 74 aa4.82□□□□□ -1.64
SHB17YKR043C RPL37AP49166 88 aaKnown RBP4.73□□□□□ -1.65
SHB17YKR043C RPS29BP41058 56 aaKnown RBP4.72□□□□□ -1.65
SHB17YKR043C RPS29AP41057 56 aaKnown RBP4.64□□□□□ -1.67
SHB17YKR043C YOR072W-BQ3E832 53 aa4.61□□□□□ -1.67
SHB17YKR043C YER175W-AQ8TGU4 54 aa4.55□□□□□ -1.68
SHB17YKR043C YBR072C-AQ3E794 53 aa4.51□□□□□ -1.69
SHB17YKR043C HHY1P39982 102 aa4.49□□□□□ -1.69
SHB17YKR043C YER078W-AQ3E7A2 54 aa4.03□□□□□ -1.76
SHB17YKR043C YHR050W-AQ05451 56 aa3.71□□□□□ -1.82
SHB17YKR043C YAL067W-AQ8TGK6 75 aa3.68□□□□□ -1.82
SHB17YKR043C YHR032W-AP0C5N6 59 aa3.66□□□□□ -1.82
SHB17YKR043C YOL164W-AQ3E7A5 60 aa3.6□□□□□ -1.83
SHB17YKR043C YLR157W-EP0CF00 54 aa3.16□□□□□ -1.9
SHB17YKR043C YHR086W-AQ3E746 53 aa2.9□□□□□ -1.95
Retrieved 63 of 5,963 RNA–protein pairs in 10.8 ms