RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	YPR153W	Q06537	140 aa		4.22	□□□□□ -1.73
SKP1	YDR328C	NOP10	Q6Q547	58 aa	Predicted RBP	4.22	□□□□□ -1.73
SKP1	YDR328C	YDR182W-A	Q3E796	67 aa		4.21	□□□□□ -1.74
SKP1	YDR328C	YOL013W-A	P0C272	63 aa	Predicted RBP	4.2	□□□□□ -1.74
SKP1	YDR328C	YKL065W-A	Q2V2P2	73 aa		4.2	□□□□□ -1.74
SKP1	YDR328C	YOR381W-A	Q3E804	55 aa		4.2	□□□□□ -1.74
SKP1	YDR328C	YOR376W-A	Q3E805	51 aa		4.19	□□□□□ -1.74
SKP1	YDR328C	YML100W-A	Q8TGT0	57 aa		4.18	□□□□□ -1.74
SKP1	YDR328C	LIP1	Q03579	150 aa		4.17	□□□□□ -1.74
SKP1	YDR328C	YGL034C	P53186	121 aa		4.16	□□□□□ -1.74
SKP1	YDR328C	YOR316C-A	Q3E806	69 aa		4.16	□□□□□ -1.74
SKP1	YDR328C	YOL166W-A	Q8TGJ1	51 aa		4.15	□□□□□ -1.75
SKP1	YDR328C	YER188C-A	P0C0V2	99 aa		4.14	□□□□□ -1.75
SKP1	YDR328C	YIL102C	P40488	101 aa		4.14	□□□□□ -1.75
SKP1	YDR328C	YMR122C	Q03879	124 aa		4.13	□□□□□ -1.75
SKP1	YDR328C	OST5	Q92316	86 aa		4.13	□□□□□ -1.75
SKP1	YDR328C	YJR128W	P47162	119 aa		4.12	□□□□□ -1.75
SKP1	YDR328C	RPL37B	P51402	88 aa	Known RBP	4.11	□□□□□ -1.75
SKP1	YDR328C	RPS30A	P0CX33	63 aa	Known RBP	4.08	□□□□□ -1.76
SKP1	YDR328C	RPS30B	P0CX34	63 aa	Known RBP	4.08	□□□□□ -1.76
SKP1	YDR328C	YHR125W	P38831	101 aa		4.06	□□□□□ -1.76
SKP1	YDR328C	YLR255C	O13574	117 aa		4.05	□□□□□ -1.76
SKP1	YDR328C	YGR146C-A	Q8TGT9	53 aa		4.05	□□□□□ -1.76
SKP1	YDR328C	YJL144W	P47009	104 aa		4.04	□□□□□ -1.76
SKP1	YDR328C	COX8	P04039	78 aa		4	□□□□□ -1.77
SKP1	YDR328C	YBR016W	P38216	128 aa		3.99	□□□□□ -1.77
SKP1	YDR328C	YBL008W-A	Q3E821	79 aa		3.98	□□□□□ -1.77
SKP1	YDR328C	HUB1	Q6Q546	73 aa		3.98	□□□□□ -1.77
SKP1	YDR328C	YFR032C-B	Q8TGU2	87 aa		3.96	□□□□□ -1.78
SKP1	YDR328C	QCR10	P37299	77 aa		3.95	□□□□□ -1.78
SKP1	YDR328C	YCR095W-A	Q3E787	52 aa		3.95	□□□□□ -1.78
SKP1	YDR328C	FYV12	Q08559	129 aa		3.94	□□□□□ -1.78
SKP1	YDR328C	YIL156W-B	Q2V2P4	73 aa		3.94	□□□□□ -1.78
SKP1	YDR328C	SDH6	Q3E785	79 aa		3.94	□□□□□ -1.78
SKP1	YDR328C	Q0017	Q9ZZX8	53 aa		3.94	□□□□□ -1.78
SKP1	YDR328C	MRX7	P53869	86 aa		3.91	□□□□□ -1.78
SKP1	YDR328C	YER175W-A	Q8TGU4	54 aa		3.91	□□□□□ -1.78
SKP1	YDR328C	OLI1	P61829	76 aa		3.89	□□□□□ -1.79
SKP1	YDR328C	SOM1	Q05676	74 aa		3.89	□□□□□ -1.79
SKP1	YDR328C	ATP17	Q06405	101 aa		3.88	□□□□□ -1.79
SKP1	YDR328C	YMR001C-A	Q8TGS9	76 aa		3.88	□□□□□ -1.79
SKP1	YDR328C	YJL009W	P47078	108 aa		3.85	□□□□□ -1.79
SKP1	YDR328C	YBR201C-A	Q2V2Q3	67 aa		3.84	□□□□□ -1.79
SKP1	YDR328C	YDR210W	Q03482	75 aa		3.77	□□□□□ -1.81
SKP1	YDR328C	YGL014C-A	P0C5N1	53 aa		3.72	□□□□□ -1.81
SKP1	YDR328C	YBL044W	P38194	122 aa		3.7	□□□□□ -1.82
SKP1	YDR328C	YML054C-A	Q3E809	52 aa		3.69	□□□□□ -1.82
SKP1	YDR328C	YOR394C-A	Q8TGJ0	55 aa		3.6	□□□□□ -1.83
SKP1	YDR328C	YER078W-A	Q3E7A2	54 aa		3.53	□□□□□ -1.84
SKP1	YDR328C	YEL014C	P39999	101 aa		3.5	□□□□□ -1.85
SKP1	YDR328C	YCR108C	Q3E819	63 aa		3.46	□□□□□ -1.86
SKP1	YDR328C	RPL37A	P49166	88 aa	Known RBP	3.45	□□□□□ -1.86
SKP1	YDR328C	YHR032W-A	P0C5N6	59 aa		3.36	□□□□□ -1.87
SKP1	YDR328C	YOR072W-B	Q3E832	53 aa		3.27	□□□□□ -1.89
SKP1	YDR328C	RPS29B	P41058	56 aa	Known RBP	3.24	□□□□□ -1.89
SKP1	YDR328C	YBR072C-A	Q3E794	53 aa		3.15	□□□□□ -1.91
SKP1	YDR328C	RPS29A	P41057	56 aa	Known RBP	3.14	□□□□□ -1.91
SKP1	YDR328C	YAL067W-A	Q8TGK6	75 aa		3.14	□□□□□ -1.91
SKP1	YDR328C	HHY1	P39982	102 aa		3.08	□□□□□ -1.92
SKP1	YDR328C	YHR050W-A	Q05451	56 aa		2.68	□□□□□ -1.98
SKP1	YDR328C	YOL164W-A	Q3E7A5	60 aa		2.67	□□□□□ -1.98
SKP1	YDR328C	YHR086W-A	Q3E746	53 aa		2.51	□□□□□ -2.01
SKP1	YDR328C	YLR157W-E	P0CF00	54 aa		2.31	□□□□□ -2.04

Retrieved 63 of 5,963 RNA–protein pairs in 5.4 ms