RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 RABGAP1Q9Y3P9 1069 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 PDS5BQ9NTI5 1447 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 SMARCA4P51532 1647 aa4.34□□□□□ -1.71
HMGB1P15-201ENST00000453854 KIF13AQ9H1H9 1805 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 BAZ1BQ9UIG0 1483 aaKnown RBP4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 ATAD2BQ9ULI0 1458 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 ZAR1LA6NP61 321 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 B9A039 149 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 F5H697 171 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 AGPSO00116 658 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 RNASET2O00584 256 aaKnown RBP4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 FCHO1O14526 889 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 MATN3O15232 486 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 DNPH1O43598 174 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 USP1O94782 785 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 SCAF4O95104 1147 aaKnown RBP4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 PYGLP06737 847 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 CKMT1AP12532 417 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 ZNF20P17024 532 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 ACRV1P26436 265 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 PRKAR1BP31321 381 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 BMPR1AP36894 532 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 GATMP50440 423 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 CDK7P50613 346 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 PDE6CP51160 858 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 PGDP52209 483 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 VAV2P52735 878 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 ALDH18A1P54886 795 aaKnown RBP4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 AP2B1P63010 937 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 GPS1Q13098 491 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 TIGD6Q17RP2 521 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 GEN1Q17RS7 908 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 CCDC96Q2M329 555 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 BEAN1Q3B7T3 259 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 HS1BP3Q53T59 392 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 INTS11Q5TA45 600 aaKnown RBP4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 TMPRSS6Q8IU80 811 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 CCDC117Q8IWD4 279 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 NRSN1Q8IZ57 195 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 ABRAQ8N0Z2 381 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 SCAMP5Q8TAC9 235 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 SUN3Q8TAQ9 357 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 CPT1CQ8TCG5 803 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 THAP4Q8WY91 577 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 HERVK_113Q902F9 699 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 ERP27Q96DN0 273 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 PPM1MQ96MI6 270 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 ZCWPW1Q9H0M4 648 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 ZNF703Q9H7S9 590 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 UNKLQ9H9P5 680 aaKnown RBP4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 GALNT9Q9HCQ5 603 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 AKIP1Q9NQ31 210 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 FSCN3Q9NQT6 498 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 INTS13Q9NVM9 706 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 CLIC5Q9NZA1 410 aa4.33□□□□□ -1.72
HMGB1P15-201ENST00000453854 EIF4G3O43432 1585 aaKnown RBP4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 FAM90A18PA6NE21 464 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 FAM90A16PA6NEW6 464 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 RRN3P2A6NIE6 340 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 FAM90A9PA6NNJ1 464 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 FAM90A5PA8MXJ8 464 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 EYA2O00167 538 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 TAF5LO75529 589 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 FAM90A15PP0C7V4 464 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 FAM90A14PP0C7W9 464 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 SRGAP2BP0DMP2 458 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 GYS1P13807 737 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 HGFP14210 728 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 RBL1P28749 1068 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 EPHA3P29320 983 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 HTR7P34969 479 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 SCAPQ12770 1279 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 CRHR2Q13324 411 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 GRM4Q14833 912 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 CLCA4Q14CN2 919 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 FAM110CQ1W6H9 321 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 FAM133BQ5BKY9 247 aaKnown RBP4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 DTX2Q86UW9 622 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 FTSJ3Q8IY81 847 aaKnown RBP4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 COLGALT2Q8IYK4 626 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 NAXEQ8NCW5 288 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 TMEM171Q8WVE6 324 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 ASB12Q8WXK4 309 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 ATG4AQ8WYN0 398 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 TMEM125Q96AQ2 219 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 FAM136AQ96C01 138 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 GRAMD1AQ96CP6 724 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 LOXL4Q96JB6 756 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 HIST1H2AAQ96QV6 131 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 C1QTNF3Q9BXJ4 246 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 ZNF768Q9H5H4 540 aaKnown RBP4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 ST6GALNAC2Q9UJ37 374 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 FEM1BQ9UK73 627 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 NOL7Q9UMY1 257 aaKnown RBP4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 DAPP1Q9UN19 280 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 SNX14Q9Y5W7 946 aa4.32□□□□□ -1.72
HMGB1P15-201ENST00000453854 HECW2Q9P2P5 1572 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 LMTK3Q96Q04 1460 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 CEP164Q9UPV0 1460 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ITIH6Q6UXX5 1313 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms