RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 DDX49Q9Y6V7 483 aaKnown RBP14.02□□□□□ -0.17
ACTN1-201ENST00000193403 ARHGAP5Q13017 1502 aa14.01□□□□□ -0.17
ACTN1-201ENST00000193403 ARHGEF12Q9NZN5 1544 aa14□□□□□ -0.17
ACTN1-201ENST00000193403 A2MP01023 1474 aa14□□□□□ -0.17
ACTN1-201ENST00000193403 USP19O94966 1318 aa14□□□□□ -0.17
ACTN1-201ENST00000193403 NUTM2FA1L443 756 aa14□□□□□ -0.17
ACTN1-201ENST00000193403 ESPNB1AK53 854 aa14□□□□□ -0.17
ACTN1-201ENST00000193403 MVPQ14764 893 aaKnown RBP13.99□□□□□ -0.17
ACTN1-201ENST00000193403 SCAPERQ9BY12 1400 aa13.99□□□□□ -0.17
ACTN1-201ENST00000193403 FAM135AQ9P2D6 1515 aa13.99□□□□□ -0.17
ACTN1-201ENST00000193403 PTMAP06454 111 aaKnown RBP13.98□□□□□ -0.17
ACTN1-201ENST00000193403 FOXD4L6Q3SYB3 417 aaPredicted RBP13.98□□□□□ -0.17
ACTN1-201ENST00000193403 FOXD4L3Q6VB84 417 aaPredicted RBP13.98□□□□□ -0.17
ACTN1-201ENST00000193403 CCDC141Q6ZP82 1450 aa13.97□□□□□ -0.17
ACTN1-201ENST00000193403 RBM10P98175 930 aaKnown RBP13.97□□□□□ -0.17
ACTN1-201ENST00000193403 NOL8Q76FK4 1167 aaKnown RBP13.97□□□□□ -0.17
ACTN1-201ENST00000193403 CARD14Q9BXL6 1004 aa13.97□□□□□ -0.17
ACTN1-201ENST00000193403 GGNBP2Q9H3C7 697 aa13.97□□□□□ -0.17
ACTN1-201ENST00000193403 MAGI2Q86UL8 1455 aa13.97□□□□□ -0.17
ACTN1-201ENST00000193403 DNTTIP2Q5QJE6 756 aaKnown RBP13.97□□□□□ -0.17
ACTN1-201ENST00000193403 NOB1Q9ULX3 412 aaKnown RBP13.97□□□□□ -0.17
ACTN1-201ENST00000193403 DDX19BQ9UMR2 479 aa13.97□□□□□ -0.17
ACTN1-201ENST00000193403 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.96□□□□□ -0.172e-7■■■■□ 20.7
ACTN1-201ENST00000193403 ZNF521Q96K83 1311 aa13.96□□□□□ -0.17
ACTN1-201ENST00000193403 KANK1Q14678 1352 aa13.96□□□□□ -0.18
ACTN1-201ENST00000193403 ADGRL2O95490 1459 aa13.96□□□□□ -0.18
ACTN1-201ENST00000193403 FAM13BQ9NYF5 915 aa13.95□□□□□ -0.18
ACTN1-201ENST00000193403 IPO8O15397 1037 aaKnown RBP13.95□□□□□ -0.18
ACTN1-201ENST00000193403 C14orf37Q86TY3 774 aa13.95□□□□□ -0.18
ACTN1-201ENST00000193403 RIPK4P57078 832 aa13.95□□□□□ -0.18
ACTN1-201ENST00000193403 PLCB2Q00722 1185 aa13.94□□□□□ -0.18
ACTN1-201ENST00000193403 TMEM57Q8N5G2 664 aa13.94□□□□□ -0.18
ACTN1-201ENST00000193403 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
ACTN1-201ENST00000193403 SSH1Q8WYL5 1049 aa13.94□□□□□ -0.18
ACTN1-201ENST00000193403 TNPO1Q92973 898 aaKnown RBP13.94□□□□□ -0.18
ACTN1-201ENST00000193403 ADGRF5Q8IZF2 1346 aa13.94□□□□□ -0.18
ACTN1-201ENST00000193403 NASPP49321 788 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-201ENST00000193403 MCTP1Q6DN14 999 aa13.94□□□□□ -0.18
ACTN1-201ENST00000193403 CALD1Q05682 793 aaKnown RBP13.93□□□□□ -0.18
ACTN1-201ENST00000193403 NSD3Q9BZ95 1437 aa13.93□□□□□ -0.18
ACTN1-201ENST00000193403 TRIM27P14373 513 aa13.93□□□□□ -0.18
ACTN1-201ENST00000193403 ZMYND15Q9H091 742 aa13.93□□□□□ -0.18
ACTN1-201ENST00000193403 MPNDQ8N594 471 aa13.92□□□□□ -0.18
ACTN1-201ENST00000193403 NGEFQ8N5V2 710 aa13.92□□□□□ -0.18
ACTN1-201ENST00000193403 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
ACTN1-201ENST00000193403 POLR1AO95602 1720 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-201ENST00000193403 ITSN2Q9NZM3 1697 aa13.92□□□□□ -0.18
ACTN1-201ENST00000193403 CAVIN1Q6NZI2 390 aaKnown RBP13.92□□□□□ -0.18
ACTN1-201ENST00000193403 ANTXR1Q9H6X2 564 aa13.92□□□□□ -0.18
ACTN1-201ENST00000193403 CLCN1P35523 988 aa13.91□□□□□ -0.18
ACTN1-201ENST00000193403 R3HCC1Q9Y3T6 440 aaKnown RBP13.91□□□□□ -0.18
ACTN1-201ENST00000193403 ASXL1Q8IXJ9 1541 aa13.91□□□□□ -0.18
ACTN1-201ENST00000193403 ATF7IPQ6VMQ6 1270 aa13.91□□□□□ -0.18
ACTN1-201ENST00000193403 KIAA1211Q6ZU35 1233 aa13.91□□□□□ -0.18
ACTN1-201ENST00000193403 ASXL2Q76L83 1435 aa13.91□□□□□ -0.18
ACTN1-201ENST00000193403 SSFA2P28290 1259 aa13.91□□□□□ -0.18
ACTN1-201ENST00000193403 GPRASP1Q5JY77 1395 aa13.9□□□□□ -0.18
ACTN1-201ENST00000193403 RNF214Q8ND24 703 aa13.9□□□□□ -0.19
ACTN1-201ENST00000193403 HMOX1P09601 288 aa13.89□□□□□ -0.19
ACTN1-201ENST00000193403 WDR63Q8IWG1 891 aa13.89□□□□□ -0.19
ACTN1-201ENST00000193403 THUMPD2Q9BTF0 503 aaKnown RBP13.89□□□□□ -0.19
ACTN1-201ENST00000193403 MINK1Q8N4C8 1332 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-201ENST00000193403 NINLQ9Y2I6 1382 aa13.89□□□□□ -0.19
ACTN1-201ENST00000193403 TRMT2AQ8IZ69 625 aaKnown RBP13.88□□□□□ -0.19
ACTN1-201ENST00000193403 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
ACTN1-201ENST00000193403 CD109Q6YHK3 1445 aa13.88□□□□□ -0.19
ACTN1-201ENST00000193403 SCAF11Q99590 1463 aaKnown RBP13.87□□□□□ -0.19
ACTN1-201ENST00000193403 SKOR2Q2VWA4 1001 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-201ENST00000193403 SYCP2Q9BX26 1530 aa13.87□□□□□ -0.19
ACTN1-201ENST00000193403 CHD1LQ86WJ1 897 aa13.87□□□□□ -0.19
ACTN1-201ENST00000193403 ADGBQ8N7X0 1667 aa13.87□□□□□ -0.19
ACTN1-201ENST00000193403 PIK3C2GO75747 1445 aa13.86□□□□□ -0.19
ACTN1-201ENST00000193403 KDM5DQ9BY66 1539 aa13.86□□□□□ -0.19
ACTN1-201ENST00000193403 RRP9O43818 475 aaKnown RBP13.86□□□□□ -0.19
ACTN1-201ENST00000193403 PLA2R1Q13018 1463 aa13.86□□□□□ -0.19
ACTN1-201ENST00000193403 WDR7Q9Y4E6 1490 aa13.86□□□□□ -0.19
ACTN1-201ENST00000193403 GAS2L3Q86XJ1 694 aa13.85□□□□□ -0.19
ACTN1-201ENST00000193403 AAMPQ13685 434 aa13.85□□□□□ -0.19
ACTN1-201ENST00000193403 K7ELQ4 463 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-201ENST00000193403 FBLN1P23142 703 aa13.84□□□□□ -0.19
ACTN1-201ENST00000193403 CASC1Q6TDU7 716 aa13.84□□□□□ -0.19
ACTN1-201ENST00000193403 TMPOP42166 694 aaKnown RBP13.84□□□□□ -0.19
ACTN1-201ENST00000193403 PRPF40AO75400 957 aaKnown RBP13.84□□□□□ -0.19
ACTN1-201ENST00000193403 TRAPPC8Q9Y2L5 1435 aa13.84□□□□□ -0.19
ACTN1-201ENST00000193403 KIF16BQ96L93 1317 aa13.83□□□□□ -0.2
ACTN1-201ENST00000193403 DIAPH1O60610 1272 aaKnown RBP13.82□□□□□ -0.2
ACTN1-201ENST00000193403 SHANK2Q9UPX8 1470 aa13.82□□□□□ -0.2
ACTN1-201ENST00000193403 EVC2Q86UK5 1308 aa13.82□□□□□ -0.2
ACTN1-201ENST00000193403 XPCQ01831 940 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-201ENST00000193403 SLC4A10Q6U841 1118 aa13.82□□□□□ -0.2
ACTN1-201ENST00000193403 ERBB4Q15303 1308 aa13.82□□□□□ -0.2
ACTN1-201ENST00000193403 INSRP06213 1382 aa13.81□□□□□ -0.2
ACTN1-201ENST00000193403 FSD2A1L4K1 749 aa13.81□□□□□ -0.2
ACTN1-201ENST00000193403 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
ACTN1-201ENST00000193403 PTMSP20962 102 aa13.81□□□□□ -0.2
ACTN1-201ENST00000193403 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
ACTN1-201ENST00000193403 CEBPAP49715 358 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-201ENST00000193403 CCDC173Q0VFZ6 552 aa13.8□□□□□ -0.2
ACTN1-201ENST00000193403 TBC1D9Q6ZT07 1266 aa13.8□□□□□ -0.2
ACTN1-201ENST00000193403 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms