RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 SPATA18Q8TC71 538 aa8.81□□□□□ -1
HMGB4-203ENST00000519684 SLC2A14Q8TDB8 520 aa8.81□□□□□ -1
HMGB4-203ENST00000519684 ZNF473Q8WTR7 871 aaKnown RBP8.81□□□□□ -1
HMGB4-203ENST00000519684 CENPTQ96BT3 561 aa8.81□□□□□ -1
HMGB4-203ENST00000519684 C9orf72Q96LT7 481 aa8.81□□□□□ -1
HMGB4-203ENST00000519684 LPIN3Q9BQK8 851 aa8.81□□□□□ -1
HMGB4-203ENST00000519684 ABT1Q9ULW3 272 aaKnown RBP8.81□□□□□ -1
HMGB4-203ENST00000519684 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.81□□□□□ -1
HMGB4-203ENST00000519684 H7C0C1 242 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 SMAPO00193 183 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 CYB561D2O14569 222 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 APOL1O14791 398 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 CA12O43570 354 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 HCRTO43612 131 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 TRAPPC3O43617 180 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 FAM107AO95990 144 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 RBP3P10745 1247 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 CHN1P15882 459 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 LMO2P25791 158 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 PTPN9P43378 593 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 ATP5OP48047 213 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 CTCFP49711 727 aaPredicted RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 SEC24CP53992 1094 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 ARL4CP56559 192 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 LILRA4P59901 499 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 MMRN1Q13201 1228 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 NOMO1Q15155 1222 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 SLC26A9Q7LBE3 791 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 B3GALNT2Q8NCR0 500 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 ARRDC4Q8NCT1 418 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 HSFY1Q96LI6 401 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 RNF157Q96PX1 679 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 PPP1R10Q96QC0 940 aaKnown RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 CCT8L2Q96SF2 557 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 UPF3AQ9H1J1 476 aaKnown RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 CHST12Q9NRB3 414 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 INTS9Q9NV88 658 aaKnown RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 TLL2Q9Y6L7 1015 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 FAM155AB1AL88 458 aaPredicted RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 XPO1O14980 1071 aaKnown RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 MDM4O15151 490 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 CDH16O75309 829 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 ENDOD1O94919 500 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 PGK1P00558 417 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 CTSHP09668 335 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 FAM163BP0C2L3 166 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 TGM2P21980 687 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 STIP1P31948 543 aaKnown RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 RPL22P35268 128 aaKnown RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 HIF1AQ16665 826 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 EFHC1Q5JVL4 640 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 ZNF618Q5T7W0 954 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 GDF6Q6KF10 455 aaPredicted RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 C1orf228Q6PIY5 440 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 CYP4V2Q6ZWL3 525 aaPredicted RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 LIMS2Q7Z4I7 341 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 VSIG1Q86XK7 387 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 RIBC1Q8N443 379 aaPredicted RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 FAM71DQ8N9W8 422 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 MDM1Q8TC05 714 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 TRIB2Q92519 343 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 PRCCQ92733 491 aaPredicted RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 ARHGEF2Q92974 986 aaKnown RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 XPO6Q96QU8 1125 aaKnown RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 MED10Q9BTT4 135 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 SNRNP25Q9BV90 132 aaKnown RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 B3GNT5Q9BYG0 378 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 VPS37BQ9H9H4 285 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 PCDH18Q9HCL0 1135 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 FAM105AQ9NUU6 356 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 ST3GAL5Q9UNP4 418 aa8.8□□□□□ -1
HMGB4-203ENST00000519684 RRP15Q9Y3B9 282 aaKnown RBP8.8□□□□□ -1
HMGB4-203ENST00000519684 EXOC1LA0A1B0GW35 172 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 PTGESO14684 152 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 GPR182O15218 404 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 SEPT4O43236 478 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 MYCNP04198 464 aaPredicted RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 THP07101 528 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 CTGFP29279 349 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 MLH1P40692 756 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 TM4SF4P48230 202 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 GDF10P55107 478 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 BCAR1P56945 870 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 PDIA2Q13087 525 aaKnown RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 CCDC38Q502W7 563 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 RAB6CQ53S08 254 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 ANKRD20A8PQ5CZ79 823 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 TNFAIP8L3Q5GJ75 292 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 ERMARDQ5T6L9 678 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 NPNTQ6UXI9 565 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 ARCQ7LC44 396 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 SRLQ86TD4 932 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 ZC3H18Q86VM9 953 aaKnown RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 UNC45BQ8IWX7 931 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 ZBED8Q8IZ13 594 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 ZFP42Q96MM3 310 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 HNRNPABQ99729 332 aaKnown RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 ZNF670Q9BS34 389 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 PHACTR1Q9C0D0 580 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 RAB6CQ9H0N0 254 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms