RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 PTPN12Q05209 780 aaKnown RBP-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RAPSNQ13702 412 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DHX34Q14147 1143 aaKnown RBP-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DIXDC1Q155Q3 683 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 KBTBD12Q3ZCT8 623 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SPINK6Q6UWN8 80 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SLC26A9Q7LBE3 791 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 VASH2Q86V25 355 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ETFBKMTQ8IXQ9 262 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RTKN2Q8IZC4 609 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ZNF567Q8N184 647 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 FAM43AQ8N2R8 423 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CAMKK1Q8N5S9 505 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 POM121L12Q8N7R1 296 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 KLHDC4Q8TBB5 520 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RASL10AQ92737 203 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 C1orf147Q96MC9 270 aaPredicted RBP-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 IL17FQ96PD4 163 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PIP5K1AQ99755 562 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 OSBPL2Q9H1P3 480 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 LHX9Q9NQ69 397 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GPRC5DQ9NZD1 345 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 IL17CQ9P0M4 197 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CDC42EP3Q9UKI2 254 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 NOC2LQ9Y3T9 749 aaKnown RBP-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CELSR2Q9HCU4 2923 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TNKS1BP1Q9C0C2 1729 aaKnown RBP-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 A0A1B0GW55 424 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 IGKV2-29A2NJV5 120 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 C16orf90A8MZG2 172 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 VWC2LB2RUY7 222 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 M0R2N6 131 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 VEGFDO43915 354 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TRIM37O94972 964 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 A1BGP04217 495 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ENO2P09104 434 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 LINC00271P0C7V0 271 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DUX4L2P0CJ85 424 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DUX4L3P0CJ86 424 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DUX4L5P0CJ88 424 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DUX4L6P0CJ89 424 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DUX4L7P0CJ90 424 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ALAS1P13196 640 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TSHRP16473 764 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TIA1P31483 386 aaKnown RBP eCLIP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GRK4P32298 578 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 MTHFRP42898 656 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 KCNJ4P48050 445 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 VAV2P52735 878 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PFN3P60673 137 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CXADRP78310 365 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PTGR1Q14914 329 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SLC39A14Q15043 492 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PDCD2Q16342 344 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CYP2A13Q16696 494 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ZFP69Q49AA0 526 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ACCSLQ4AC99 568 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 HIGD2BQ4VC39 106 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TSHZ3Q63HK5 1081 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 OLFML2AQ68BL7 652 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TMEM200BQ69YZ2 307 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DRICH1Q6PGQ1 229 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DUX4L9Q6RFH8 374 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 LCTLQ6UWM7 567 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DPP8Q6V1X1 898 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 KDM7AQ6ZMT4 941 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 FOXL2NBQ6ZUU3 175 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CXXC5Q7LFL8 322 aaKnown RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 UBE2Q1Q7Z7E8 422 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 MCATQ8IVS2 390 aaKnown RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 MAPKAPK5Q8IW41 473 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 MAML2Q8IZL2 1156 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 HS6ST3Q8IZP7 471 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DEFB119Q8N690 84 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 LILRB1Q8NHL6 650 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SLC7A14Q8TBB6 771 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 WDR20Q8TBZ3 569 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TBC1D5Q92609 795 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GLMNQ92990 594 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 OSBP2Q969R2 916 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ZNF428Q96B54 188 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 FBXL20Q96IG2 436 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ZNF382Q96SR6 550 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SETDB2Q96T68 719 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ZFYVE21Q9BQ24 234 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GPATCH1Q9BRR8 931 aaKnown RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 MTFR1LQ9H019 292 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 IKZF5Q9H5V7 419 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CHST7Q9NS84 486 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TMEM39AQ9NV64 488 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RPS6KB2Q9UBS0 482 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DNAJB11Q9UBS4 358 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DUX4Q9UBX2 424 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 FAM184BQ9ULE4 1060 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PYGO1Q9Y3Y4 419 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 USP15Q9Y4E8 981 aaPredicted RBP-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 INSL5Q9Y5Q6 135 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 NOX1Q9Y5S8 564 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ATRNL1Q5VV63 1379 aa-1.9□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ASH1LQ9NR48 2969 aaKnown RBP-1.91□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms