RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 CDHR3Q6ZTQ4 885 aa9.27□□□□□ -0.92
THBS3-201ENST00000368378 ZCCHC9Q8N567 271 aaKnown RBP9.27□□□□□ -0.92
THBS3-201ENST00000368378 TMC2Q8TDI7 906 aa9.27□□□□□ -0.92
THBS3-201ENST00000368378 SERAC1Q96JX3 654 aa9.27□□□□□ -0.92
THBS3-201ENST00000368378 ST6GALNAC4Q9H4F1 302 aa9.27□□□□□ -0.92
THBS3-201ENST00000368378 SUDS3Q9H7L9 328 aaPredicted RBP9.27□□□□□ -0.92
THBS3-201ENST00000368378 A1CFQ9NQ94 594 aaKnown RBP9.27□□□□□ -0.92
THBS3-201ENST00000368378 IP6K2Q9UHH9 426 aa9.27□□□□□ -0.92
THBS3-201ENST00000368378 AK5Q9Y6K8 562 aa9.27□□□□□ -0.92
THBS3-201ENST00000368378 RGPD3A6NKT7 1758 aaPredicted RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 RGPD4Q7Z3J3 1758 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 B2RBV5 119 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 NOP56O00567 594 aaKnown RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 LYPLA2O95372 231 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 ITGBL1O95965 494 aaPredicted RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 C4BPAP04003 597 aaKnown RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 GSTA1P08263 222 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 T-ENOLP0DO92 83 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 GEMIN4P57678 1058 aaKnown RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 IRX1P78414 480 aaPredicted RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 CENPCQ03188 943 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 MKRN3Q13064 507 aaKnown RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 KRT81Q14533 505 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 GLRA4Q5JXX5 417 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 CCDC62Q6P9F0 684 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 CRELD2Q6UXH1 353 aaPredicted RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 TTC30AQ86WT1 665 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 GBP7Q8N8V2 638 aaPredicted RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 MAIP1Q8WWC4 291 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 CPT1BQ92523 772 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 CPB2Q96IY4 423 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 FAM210AQ96ND0 272 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 CPXM1Q96SM3 734 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 MIPEPQ99797 713 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 NMUR2Q9GZQ4 415 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 DEFB129Q9H1M3 183 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 NMRK2Q9NPI5 230 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 CLUHO75153 1309 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 CITO14578 2027 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 UNCXA6NJT0 531 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 SH3BP5O60239 455 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 EDF1O60869 148 aaKnown RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 LYPLA1O75608 230 aaPredicted RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 NAT2P11245 290 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 AMPD1P23109 780 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 KLRC2P26717 231 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 ABCD1P33897 745 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 ARL4CP56559 192 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 SESN2P58004 480 aaPredicted RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 UBAP2LQ14157 1087 aaKnown RBP9.27□□□□□ -0.93
THBS3-201ENST00000368378 ZNF568Q3ZCX4 644 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 TNFAIP8L3Q5GJ75 292 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 CIAPIN1Q6FI81 312 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 NIPA1Q7RTP0 329 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 TMEM35BQ8NCS4 154 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 AGAP3Q96P47 875 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 TWNKQ96RR1 684 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 TRIM55Q9BYV6 548 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 RRAGCQ9HB90 399 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 MYOZ2Q9NPC6 264 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 INPP5FQ9Y2H2 1132 aa9.27□□□□□ -0.93
THBS3-201ENST00000368378 KIAA1217Q5T5P2 1943 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 CXorf49A8MYA2 514 aaPredicted RBP9.26□□□□□ -0.93
THBS3-201ENST00000368378 GOLGA8TH3BQL2 631 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 PEX11AO75192 247 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 PDE5AO76074 875 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 ITGB3P05106 788 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 ETS2P15036 469 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 SLC1A1P43005 524 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 VCPP55072 806 aaKnown RBP9.26□□□□□ -0.93
THBS3-201ENST00000368378 BPIFB4P59827 614 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 TMEM132BQ14DG7 1078 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 CFAP157Q5JU67 520 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 TLDC1Q6P9B6 456 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 CLNKQ7Z7G1 428 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 ALLCQ8N6M5 410 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 RNF148Q8N7C7 305 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 EXD1Q8NHP7 514 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 NSUN6Q8TEA1 469 aaKnown RBP9.26□□□□□ -0.93
THBS3-201ENST00000368378 NDRG1Q92597 394 aaKnown RBP9.26□□□□□ -0.93
THBS3-201ENST00000368378 SLC7A6OSQ96CW6 309 aaPredicted RBP9.26□□□□□ -0.93
THBS3-201ENST00000368378 RBM41Q96IZ5 413 aaKnown RBP9.26□□□□□ -0.93
THBS3-201ENST00000368378 B3GNT5Q9BYG0 378 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 CCDC134Q9H6E4 229 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 RMI1Q9H9A7 625 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 SLC5A4Q9NY91 659 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 KLHL42Q9P2K6 505 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 CYTH4Q9UIA0 394 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 FIS1Q9Y3D6 152 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 SCINQ9Y6U3 715 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 hCG_1818297A0A087WSY0 165 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 COPEO14579 308 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 MCF2LO15068 1137 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 PLA2G6O60733 806 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 RNF8O76064 485 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 OAS1P00973 400 aaKnown RBP9.26□□□□□ -0.93
THBS3-201ENST00000368378 ATP4AP20648 1035 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 ACO1P21399 889 aaKnown RBP9.26□□□□□ -0.93
THBS3-201ENST00000368378 MIPP30301 263 aa9.26□□□□□ -0.93
THBS3-201ENST00000368378 MAN1A1P33908 653 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms