RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 KRT16P08779 473 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 KRT4P19013 534 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 ARL4CP56559 192 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 SPARCL1Q14515 664 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 TAZQ16635 292 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 AMHR2Q16671 573 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 CDO1Q16878 200 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 EFHC2Q5JST6 749 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 ZC3H18Q86VM9 953 aaKnown RBP10.52□□□□□ -0.72
LRRC28-216ENST00000559819 IGDCC3Q8IVU1 814 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 GPC2Q8N158 579 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 KLHL29Q96CT2 875 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 MYLK2Q9H1R3 596 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 PDZD7Q9H5P4 517 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 GPATCH2LQ9NWQ4 482 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.52□□□□□ -0.72
LRRC28-216ENST00000559819 CHMP2BQ9UQN3 213 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 STK38LQ9Y2H1 464 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.52□□□□□ -0.72
LRRC28-216ENST00000559819 PPME1Q9Y570 386 aa10.52□□□□□ -0.72
LRRC28-216ENST00000559819 ANK1P16157 1881 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 CFAP73A6NFT4 308 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 TYROBPO43914 113 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 IL18RAPO95256 599 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 MAP3K6O95382 1288 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 INSRRP14616 1297 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 GPD2P43304 727 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 RGS7P49802 495 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 GEMIN4P57678 1058 aaKnown RBP10.52□□□□□ -0.73
LRRC28-216ENST00000559819 NR1H3Q13133 447 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 KCTD2Q14681 263 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 PREPLQ4J6C6 727 aaPredicted RBP10.52□□□□□ -0.73
LRRC28-216ENST00000559819 RNF43Q68DV7 783 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 LVRNQ6Q4G3 990 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 C3orf62Q6ZUJ4 267 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 MCRS1Q96EZ8 462 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 PAFAH2Q99487 392 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 CXCL16Q9H2A7 254 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 SMARCAD1Q9H4L7 1026 aa10.52□□□□□ -0.73
LRRC28-216ENST00000559819 OTOFQ9HC10 1997 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 HBP1O60381 514 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 RBP3P10745 1247 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 GCLCP48506 637 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-216ENST00000559819 CDH6P55285 790 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 ZNF268Q14587 947 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-216ENST00000559819 SLC10A6Q3KNW5 377 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 C1orf228Q6PIY5 440 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 FAM183BPQ6ZVS7 135 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 PLCD3Q8N3E9 789 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 C12orf29Q8N999 325 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 SPATA18Q8TC71 538 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 FNIP1Q8TF40 1166 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 RXFP2Q8WXD0 754 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 HPDLQ96IR7 371 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 ALG13Q9NP73 1137 aaKnown RBP10.51□□□□□ -0.73
LRRC28-216ENST00000559819 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.51□□□□□ -0.73
LRRC28-216ENST00000559819 SLC24A2Q9UI40 661 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 ZMYND8Q9ULU4 1186 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-216ENST00000559819 SMG5Q9UPR3 1016 aaKnown RBP10.51□□□□□ -0.73
LRRC28-216ENST00000559819 APOC4-APOC2K7ER74 178 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 MCF2LO15068 1137 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 APOC2P02655 101 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 NDST1P52848 882 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 DPYSL3Q14195 570 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 R3HDM1Q15032 1099 aaKnown RBP10.51□□□□□ -0.73
LRRC28-216ENST00000559819 PDK4Q16654 411 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 HHATQ5VTY9 493 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 OR6B2Q6IFH4 312 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 CYP4V2Q6ZWL3 525 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-216ENST00000559819 PCGF5Q86SE9 256 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 PALM2Q8IXS6 379 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 ATP11CQ8NB49 1132 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 TTC13Q8NBP0 860 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 CMASQ8NFW8 434 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-216ENST00000559819 LRRC8CQ8TDW0 803 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 PRMT7Q9NVM4 692 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-216ENST00000559819 WDR35Q9P2L0 1181 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 AKT3Q9Y243 479 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 CHKBQ9Y259 395 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 L3MBTL1Q9Y468 752 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 MCM3APO60318 1980 aa10.51□□□□□ -0.73
LRRC28-216ENST00000559819 DNAJC25-GNG10A0A024R161 153 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 E5RJQ4 531 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 MAGEB2O15479 319 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 AVILO75366 819 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 RNF8O76064 485 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 ZNF286BP0CG31 522 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 ARF4P18085 180 aaPredicted RBP10.5□□□□□ -0.73
LRRC28-216ENST00000559819 ADRA1DP25100 572 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 ACCSLQ4AC99 568 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 FAXCQ5TGI0 409 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 DARS2Q6PI48 645 aaKnown RBP10.5□□□□□ -0.73
LRRC28-216ENST00000559819 MZB1Q8WU39 189 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 ERP27Q96DN0 273 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 RNF19AQ9NV58 838 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 SLC17A7Q9P2U7 560 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 EFR3BQ9Y2G0 817 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 STARD13Q9Y3M8 1113 aa10.5□□□□□ -0.73
LRRC28-216ENST00000559819 EDF1O60869 148 aaKnown RBP10.5□□□□□ -0.73
LRRC28-216ENST00000559819 SLC25A27O95847 323 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms