RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	SLC46A2	Q9BY10	475 aa		18.44	■□□□□ 0.54
MBD1-221	ENST00000589867	NIF3L1	Q9GZT8	377 aa		18.44	■□□□□ 0.54
MBD1-221	ENST00000589867	ATXN3L	Q9H3M9	355 aa		18.44	■□□□□ 0.54
MBD1-221	ENST00000589867	RAB20	Q9NX57	234 aa		18.44	■□□□□ 0.54
MBD1-221	ENST00000589867	WNT16	Q9UBV4	365 aa		18.44	■□□□□ 0.54
MBD1-221	ENST00000589867	SHISA7	A6NL88	538 aa		18.43	■□□□□ 0.54
MBD1-221	ENST00000589867		F8VP50	259 aa		18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	CSH1	P0DML2	217 aa		18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	CSH2	P0DML3	217 aa		18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	MARS	P56192	900 aa	Known RBP	18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	IRF2BP1	Q8IU81	584 aa		18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	TRIM59	Q8IWR1	403 aa		18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	FBXL6	Q8N531	539 aa		18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	C12orf29	Q8N999	325 aa		18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	ZMIZ2	Q8NF64	920 aa		18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	ELOVL4	Q9GZR5	314 aa		18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	CYP3A43	Q9HB55	503 aa		18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	KIF26A	Q9ULI4	1882 aa	Predicted RBP	18.43	■□□□□ 0.54
MBD1-221	ENST00000589867	BICDL2	A1A5D9	508 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	CILP	O75339	1184 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	PRAMEF12	O95522	483 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	P4HA1	P13674	534 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	CCDC130	P13994	396 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	CDC25C	P30307	473 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	FMO5	P49326	533 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	GRM2	Q14416	872 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	DPCR1	Q3MIW9	517 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	GPR158	Q5T848	1215 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	TCERG1L	Q5VWI1	586 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	FAM35A	Q86V20	835 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	UNC93A	Q86WB7	457 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	ARID3B	Q8IVW6	561 aa	Predicted RBP	18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	LMO3	Q8TAP4	145 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	RIN3	Q8TB24	985 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	C8orf48	Q96LL4	319 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	TTLL2	Q9BWV7	592 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	SRRT	Q9BXP5	876 aa	Known RBP	18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	GPR88	Q9GZN0	384 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	NUP62CL	Q9H1M0	184 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	TASP1	Q9H6P5	420 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	METTL14	Q9HCE5	456 aa	Known RBP	18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	ZFP14	Q9HCL3	533 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	RWDD2A	Q9UIY3	292 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	MYH10	P35580	1976 aa		18.42	■□□□□ 0.54
MBD1-221	ENST00000589867	HEPACAM2	A8MVW5	462 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	ARNTL	O00327	626 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	PMM2	O15305	246 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	STX10	O60499	249 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	BEST1	O76090	585 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	FGF19	O95750	216 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	WEE1	P30291	646 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	GRIK1	P39086	918 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	TXNDC8	Q6A555	127 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	SIX5	Q8N196	739 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	UBR7	Q8N806	425 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	FAXDC2	Q96IV6	333 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	KCNK16	Q96T55	309 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	SMO	Q99835	787 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	SMG9	Q9H0W8	520 aa	Known RBP	18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	CA14	Q9ULX7	337 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	PATJ	Q8NI35	1801 aa		18.41	■□□□□ 0.54
MBD1-221	ENST00000589867	TNFRSF10B	O14763	440 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	PI15	O43692	258 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	CD58	P19256	250 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	CCDC40	Q4G0X9	1142 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	RBM43	Q6ZSC3	357 aa	Known RBP	18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	TMEM105	Q8N8V8	129 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	MLKL	Q8NB16	471 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	TNIP3	Q96KP6	325 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	CEP295NL	Q96MC4	621 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	GBP4	Q96PP9	640 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	SLC22A12	Q96S37	553 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	IMPG2	Q9BZV3	1241 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	SLITRK6	Q9H5Y7	841 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	IL37	Q9NZH6	218 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	TICRR	Q7Z2Z1	1910 aa		18.4	■□□□□ 0.54
MBD1-221	ENST00000589867	TRIM66	O15016	1216 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	CLSTN1	O94985	981 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	AVPR2	P30518	371 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	TAF12	Q16514	161 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	DENND5B	Q6ZUT9	1274 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	MON1A	Q86VX9	555 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	MFSD6L	Q8IWD5	586 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	MAB21L3	Q8N8X9	362 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	SLC2A14	Q8TDB8	520 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	CSNK1G1	Q9HCP0	422 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	ARHGEF3	Q9NR81	526 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	CISH	Q9NSE2	258 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	FAM49B	Q9NUQ9	324 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	GCNT4	Q9P109	453 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	FBXL21	Q9UKT6	434 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	CCL26	Q9Y258	94 aa		18.39	■□□□□ 0.53
MBD1-221	ENST00000589867	HHLA1	C9JL84	531 aa		18.38	■□□□□ 0.53
MBD1-221	ENST00000589867	RAD23B	P54727	409 aa		18.38	■□□□□ 0.53
MBD1-221	ENST00000589867	FCHO2	Q0JRZ9	810 aa		18.38	■□□□□ 0.53
MBD1-221	ENST00000589867	KCNH2	Q12809	1159 aa		18.38	■□□□□ 0.53
MBD1-221	ENST00000589867	CMTM8	Q8IZV2	173 aa		18.38	■□□□□ 0.53
MBD1-221	ENST00000589867	SLC4A11	Q8NBS3	891 aa		18.38	■□□□□ 0.53
MBD1-221	ENST00000589867	KAT5	Q92993	513 aa		18.38	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms