RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 PIK3CAP42336 1068 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 NDST1P52848 882 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 CACNA2D1P54289 1103 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 CYP4F8P98187 520 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 PFKPQ01813 784 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 GRM2Q14416 872 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 CWF19L1Q69YN2 538 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 TXNDC8Q6A555 127 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 KLHL10Q6JEL2 608 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 ACOT1Q86TX2 421 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 TRIML1Q8N9V2 468 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 FBXL13Q8NEE6 735 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 TATDN2Q93075 761 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 FAXDC2Q96IV6 333 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 TNIP3Q96KP6 325 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 CEP63Q96MT8 703 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 DDX23Q9BUQ8 820 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 ZNF518BQ9C0D4 1074 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 METTL14Q9HCE5 456 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 TRPV5Q9NQA5 729 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 ARHGEF3Q9NR81 526 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 UXTQ9UBK9 157 aaPredicted RBP17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 ZMYM5Q9UJ78 669 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 NCANO14594 1321 aa17.18■□□□□ 0.34
PDLIM5-216ENST00000511767 SHISA7A6NL88 538 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 F8VP50 259 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 AOC1P19801 751 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 GDI1P31150 447 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 NUBP1P53384 320 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 USP46P62068 366 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 NOP14P78316 857 aaKnown RBP17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 CBWD6Q4V339 395 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 CBWD3Q5JTY5 395 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 CBWD5Q5RIA9 395 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 SCARA5Q6ZMJ2 495 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 CMTM8Q8IZV2 173 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 FUKQ8N0W3 1084 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 MAB21L3Q8N8X9 362 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 WHAMMQ8TF30 809 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 DEPDC1BQ8WUY9 529 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 IRF7Q92985 503 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 SLC35C1Q96A29 364 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 SHDQ96IW2 340 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 TWNKQ96RR1 684 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 KCNK16Q96T55 309 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 BRD9Q9H8M2 597 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 OBP2AQ9NY56 170 aa17.17■□□□□ 0.34
PDLIM5-216ENST00000511767 STK25O00506 426 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 TRIM66O15016 1216 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 DDX6P26196 483 aaKnown RBP eCLIP17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 MXI1P50539 228 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 STX17P56962 302 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 PRKCQQ04759 706 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 FCHO2Q0JRZ9 810 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 INCA1Q0VD86 236 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 DENND5BQ6ZUT9 1274 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 C12orf29Q8N999 325 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 MRPS31Q92665 395 aaKnown RBP17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 MED15Q96RN5 788 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 CYP2S1Q96SQ9 504 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 TTLL2Q9BWV7 592 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 SRRTQ9BXP5 876 aaKnown RBP17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 IMPG2Q9BZV3 1241 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 ELOVL4Q9GZR5 314 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 TBC1D17Q9HA65 648 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 IL37Q9NZH6 218 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 HMGXB4Q9UGU5 601 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 CACNA1HO95180 2353 aa17.16■□□□□ 0.34
PDLIM5-216ENST00000511767 BICDL2A1A5D9 508 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 ARNTLO00327 626 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 ZNF263O14978 683 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 PMM2O15305 246 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 CHADO15335 359 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 TADA3O75528 432 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 CLSTN1O94985 981 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 ANXA13P27216 316 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 ORC1Q13415 861 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 MLF2Q15773 248 aaPredicted RBP17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 TCERG1LQ5VWI1 586 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 CCDC150Q8NCX0 1101 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 PRSS33Q8NF86 280 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 DNASE1L2Q92874 299 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 IPO9Q96P70 1041 aaKnown RBP17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 GCNAQ96QF7 691 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 PRRX2Q99811 253 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 NIF3L1Q9GZT8 377 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 SMG9Q9H0W8 520 aaKnown RBP17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 CLSTN2Q9H4D0 955 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 GCNT4Q9P109 453 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 SIT1Q9Y3P8 196 aa17.15■□□□□ 0.34
PDLIM5-216ENST00000511767 KANSL1LA0AUZ9 987 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 DPYSL4O14531 572 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 TNFRSF10BO14763 440 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 CILPO75339 1184 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 PRAMEF12O95522 483 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 TCF15Q12870 199 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 PAK1Q13153 545 aa17.14■□□□□ 0.33
PDLIM5-216ENST00000511767 DCAF17Q5H9S7 520 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms