RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 TAF12Q16514 161 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 C4orf50Q6ZRC1 276 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 GAREM2Q75VX8 874 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 OSTM1Q86WC4 334 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 ST13P5Q8NFI4 369 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 ZSCAN18Q8TBC5 510 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 ZNF516Q92618 1163 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 DNASE1L2Q92874 299 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 CEP295NLQ96MC4 621 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 GCNAQ96QF7 691 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 MMS19Q96T76 1030 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 LPIN3Q9BQK8 851 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 GTPBP4Q9BZE4 634 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 SLITRK6Q9H5Y7 841 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 TBC1D17Q9HA65 648 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 TRPV5Q9NQA5 729 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 TMLHEQ9NVH6 421 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 RMND1Q9NWS8 449 aa19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 CIZ1Q9ULV3 898 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-216ENST00000526055 LRRIQ3A6PVS8 624 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 SOBPA7XYQ1 873 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 PHACTR2O75167 634 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 CSH1P0DML2 217 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 CSH2P0DML3 217 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 RPL13P26373 211 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 GABRR2P28476 465 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 MAGEA11P43364 429 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 TNNC1P63316 161 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 FAM160A1Q05DH4 1040 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 TCF15Q12870 199 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 SNW1Q13573 536 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 MLF2Q15773 248 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 WDR72Q3MJ13 1102 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 SLC44A4Q53GD3 710 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 SPATA2LQ8IUW3 424 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 PLEKHO2Q8TD55 490 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 ZSWIM3Q96MP5 696 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 TIGD1Q96MW7 591 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 GSDMAQ96QA5 445 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 SYT15Q9BQS2 421 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 PI4K2AQ9BTU6 479 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 TRMT61BQ9BVS5 477 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 ATXN3LQ9H3M9 355 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 ZNF334Q9HCZ1 680 aaPredicted RBP19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 OBP2AQ9NY56 170 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 HOOK1Q9UJC3 728 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 GTF3C4Q9UKN8 822 aa19.74■□□□□ 0.75
TSPAN4-216ENST00000526055 STK25O00506 426 aa19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 NRG2O14511 850 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 C4BPAP04003 597 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 GJA1P17302 382 aa19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 PSMC3P17980 439 aa19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 ACAT1P24752 427 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 MFSD6LQ8IWD5 586 aa19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 ELOA2Q8IYF1 753 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 ENGASEQ8NFI3 743 aa19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 DDX23Q9BUQ8 820 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 OSBPL6Q9BZF3 934 aa19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 PLA2G2FQ9BZM2 168 aa19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 XYLT2Q9H1B5 865 aa19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 SNX25Q9H3E2 840 aa19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 IL21Q9HBE4 155 aa19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 UXTQ9UBK9 157 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 CACNA1HO95180 2353 aa19.73■□□□□ 0.75
TSPAN4-216ENST00000526055 SMC2O95347 1197 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 NR2F2P24468 414 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 DDX6P26196 483 aaKnown RBP eCLIP19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 GNL1P36915 607 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 CASP4P49662 377 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 MYL6P60660 151 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 BIRC3Q13489 604 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 EDRF1Q3B7T1 1238 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 ZACNQ401N2 412 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 COBLL1Q53SF7 1204 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 TDRD10Q5VZ19 366 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 CEP135Q66GS9 1140 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 VSTM1Q6UX27 236 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 VITQ6UXI7 678 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 INTS8Q75QN2 995 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 CCDC105Q8IYK2 499 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 GIPC2Q8TF65 315 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 IRF7Q92985 503 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 TASP1Q9H6P5 420 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 BRD9Q9H8M2 597 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 MAGEC2Q9UBF1 373 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 SIT1Q9Y3P8 196 aa19.72■□□□□ 0.75
TSPAN4-216ENST00000526055 KANSL1LA0AUZ9 987 aa19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 MYBPHLA2RUH7 354 aa19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 PI15O43692 258 aa19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 HMGA1P17096 107 aaKnown RBP19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 CYP2F1P24903 491 aa19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 LMO2P25791 158 aa19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 NCOA4Q13772 614 aa19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 ZNF699Q32M78 642 aa19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 GPR158Q5T848 1215 aa19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 ARID3BQ8IVW6 561 aaPredicted RBP19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 SPATA20Q8TB22 786 aa19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 MYCBPAPQ8TBZ2 947 aa19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 TAF4BQ92750 862 aa19.71■□□□□ 0.75
TSPAN4-216ENST00000526055 TRMT2BQ96GJ1 504 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms