RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 ARHGEF19Q8IW93 802 aa5.79□□□□□ -1.48
PCM1-219ENST00000523540 CPEB3Q8NE35 698 aaKnown RBP5.79□□□□□ -1.48
PCM1-219ENST00000523540 KBTBD7Q8WVZ9 684 aa5.79□□□□□ -1.48
PCM1-219ENST00000523540 LRTOMTQ8WZ04 291 aa5.79□□□□□ -1.48
PCM1-219ENST00000523540 DDX17Q92841 729 aaKnown RBP5.79□□□□□ -1.48
PCM1-219ENST00000523540 NACC2Q96BF6 587 aa5.79□□□□□ -1.48
PCM1-219ENST00000523540 P2RX7Q99572 595 aaKnown RBP5.79□□□□□ -1.48
PCM1-219ENST00000523540 TRIM54Q9BYV2 358 aa5.79□□□□□ -1.48
PCM1-219ENST00000523540 SLC2A4RGQ9NR83 387 aa5.79□□□□□ -1.48
PCM1-219ENST00000523540 TMEM74BQ9NUR3 256 aa5.79□□□□□ -1.48
PCM1-219ENST00000523540 ETAA1Q9NY74 926 aa5.79□□□□□ -1.48
PCM1-219ENST00000523540 CAND2O75155 1236 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 KIF20AO95235 890 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 TRIM27P14373 513 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 FDXRP22570 491 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 CXADRP78310 365 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 PIGFQ07326 219 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 DPTQ07507 201 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 ZNF844Q08AG5 666 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 CYP2A13Q16696 494 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 LY6G5CQ5SRR4 150 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.78□□□□□ -1.48
PCM1-219ENST00000523540 TMPRSS9Q7Z410 1059 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 NSUN7Q8NE18 718 aaKnown RBP5.78□□□□□ -1.48
PCM1-219ENST00000523540 BOD1Q96IK1 185 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 DPH1Q9BZG8 443 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 IKZF4Q9H2S9 585 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 NRDE2Q9H7Z3 1164 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 RNF181Q9P0P0 153 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 TPCN1Q9ULQ1 816 aa5.78□□□□□ -1.48
PCM1-219ENST00000523540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.78□□□□□ -1.48
PCM1-219ENST00000523540 CENPVL1A0A0U1RR11 272 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 CCDC195A0A1B0GUA6 201 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 TBX3O15119 743 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 LPXNO60711 386 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 SUN1O94901 812 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 PIM1P11309 404 aaPredicted RBP5.77□□□□□ -1.49
PCM1-219ENST00000523540 MYF5P13349 255 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 KCNA2P16389 499 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 EN2P19622 333 aaPredicted RBP5.77□□□□□ -1.49
PCM1-219ENST00000523540 DDX6P26196 483 aaKnown RBP eCLIP5.77□□□□□ -1.49
PCM1-219ENST00000523540 SLC7A1P30825 629 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 KCNJ5P48544 419 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 TOB1P50616 345 aaPredicted RBP5.77□□□□□ -1.49
PCM1-219ENST00000523540 POLD3Q15054 466 aaPredicted RBP5.77□□□□□ -1.49
PCM1-219ENST00000523540 TAPT1Q6NXT6 567 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 PCSK9Q8NBP7 692 aaKnown RBP5.77□□□□□ -1.49
PCM1-219ENST00000523540 POC1BQ8TC44 478 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 APIPQ96GX9 242 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 TRIB1Q96RU8 372 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 SMOQ99835 787 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 CNPPD1Q9BV87 410 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 ALOXE3Q9BYJ1 711 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 SIK2Q9H0K1 926 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 ARNT2Q9HBZ2 717 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 MTO1Q9Y2Z2 717 aaKnown RBP5.77□□□□□ -1.49
PCM1-219ENST00000523540 NEU2Q9Y3R4 380 aa5.77□□□□□ -1.49
PCM1-219ENST00000523540 A0A1W2PS29 197 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 MYADML2A6NDP7 307 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 TMEM191CA6NGB0 347 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 ISM1B1AKI9 464 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 M0QYG6 137 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 POLRMTO00411 1230 aaKnown RBP5.76□□□□□ -1.49
PCM1-219ENST00000523540 ERN1O75460 977 aaKnown RBP5.76□□□□□ -1.49
PCM1-219ENST00000523540 CDKL5O76039 1030 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 UNC5CO95185 931 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 ABHD16AO95870 558 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 THP07101 528 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 PEX2P28328 305 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 SPDYE7PQ495Y7 208 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 TIGD2Q4W5G0 525 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 COBLL1Q53SF7 1204 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 FAM160B1Q5W0V3 765 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 PPP4R4Q6NUP7 873 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 MMRN2Q9H8L6 949 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 SMURF2Q9HAU4 748 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 GALNT9Q9HCQ5 603 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 PLEKHM1Q9Y4G2 1056 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 PCDHGB6Q9Y5F9 930 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 NOX1Q9Y5S8 564 aa5.76□□□□□ -1.49
PCM1-219ENST00000523540 E7ENX8 843 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 BTN3A1O00481 513 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 APAF1O14727 1248 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 MGEA5O60502 916 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 SPDEFO95238 335 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 ANXA11P50995 505 aaKnown RBP5.75□□□□□ -1.49
PCM1-219ENST00000523540 SUMO3P55854 103 aaPredicted RBP5.75□□□□□ -1.49
PCM1-219ENST00000523540 MC2RQ01718 297 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 TAP2Q03519 686 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 SCAPQ12770 1279 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 DYRK1AQ13627 763 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 BOP1Q14137 746 aaKnown RBP5.75□□□□□ -1.49
PCM1-219ENST00000523540 SAFBQ15424 915 aaKnown RBP eCLIP5.75□□□□□ -1.49
PCM1-219ENST00000523540 CNGA2Q16280 664 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 CCSAPQ6IQ19 270 aaPredicted RBP5.75□□□□□ -1.49
PCM1-219ENST00000523540 KSR2Q6VAB6 950 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 SLC30A10Q6XR72 485 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 NOL8Q76FK4 1167 aaKnown RBP5.75□□□□□ -1.49
PCM1-219ENST00000523540 CLNKQ7Z7G1 428 aa5.75□□□□□ -1.49
PCM1-219ENST00000523540 KRT78Q8N1N4 520 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms