RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 SOX17Q9H6I2 414 aaPredicted RBP11.28□□□□□ -0.6
SS18-221ENST00000582448 DCTN4Q9UJW0 460 aa11.28□□□□□ -0.6
SS18-221ENST00000582448 BARX2Q9UMQ3 279 aaPredicted RBP11.28□□□□□ -0.6
SS18-221ENST00000582448 PCDHGC5Q9Y5F6 944 aa11.28□□□□□ -0.6
SS18-221ENST00000582448 GOLGA6L6A8MZA4 724 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 PER2O15055 1255 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 STAM2O75886 525 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 ADCY5O95622 1261 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 DLGAP3O95886 979 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 ITGB1P05556 798 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 CIITAP33076 1130 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 SETQ01105 290 aaPredicted RBP11.27□□□□□ -0.61
SS18-221ENST00000582448 PCDH1Q08174 1060 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 TMEM62Q0P6H9 643 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 DPCR1Q3MIW9 517 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 FBXO47Q5MNV8 452 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 TAF2Q6P1X5 1199 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 C11orf57Q6ZUT1 292 aaPredicted RBP11.27□□□□□ -0.61
SS18-221ENST00000582448 BMP8AQ7Z5Y6 402 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 RTN4RL1Q86UN2 441 aaPredicted RBP11.27□□□□□ -0.61
SS18-221ENST00000582448 MSLNLQ96KJ4 702 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 MBOAT7Q96N66 472 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 INPP4AQ96PE3 977 aaPredicted RBP11.27□□□□□ -0.61
SS18-221ENST00000582448 CEP41Q9BYV8 373 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 TLE6Q9H808 572 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 AGO3Q9H9G7 860 aaKnown RBP11.27□□□□□ -0.61
SS18-221ENST00000582448 CLEC1BQ9P126 229 aa11.27□□□□□ -0.61
SS18-221ENST00000582448 PIEZO1Q92508 2521 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 A0A087X0B3 334 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 PP2D1A8MPX8 630 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 IKBKBO14920 756 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 ATP9AO75110 1047 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 EYA4O95677 639 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 PLCG1P19174 1290 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 CDC25AP30304 524 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 GATMP50440 423 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 MYL5Q02045 173 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 TCF15Q12870 199 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 STIM1Q13586 685 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 MORC3Q14149 939 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 XP32Q5T750 250 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 ISM2Q6H9L7 571 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 TSHZ1Q6ZSZ6 1077 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 SV2BQ7L1I2 683 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 AOPEPQ8N6M6 819 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 EFHBQ8N7U6 833 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 SEPT1Q8WYJ6 367 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 TRIM5Q9C035 493 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 CLEC4MQ9H2X3 399 aaPredicted RBP11.26□□□□□ -0.61
SS18-221ENST00000582448 RC3H2Q9HBD1 1191 aaKnown RBP11.26□□□□□ -0.61
SS18-221ENST00000582448 KCNMB3Q9NPA1 279 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 TCEAL9Q9UHQ7 104 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 MAN1B1Q9UKM7 699 aa11.26□□□□□ -0.61
SS18-221ENST00000582448 USP15Q9Y4E8 981 aaPredicted RBP11.26□□□□□ -0.61
SS18-221ENST00000582448 WDFY4Q6ZS81 3184 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 LOC100289279A0A1B0GTE1 492 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 LOC730098B7Z3J9 87 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 M0QZ92 97 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 STAG3L1P0CL83 205 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 SP100P23497 879 aaPredicted RBP11.25□□□□□ -0.61
SS18-221ENST00000582448 CCT6AP40227 531 aaKnown RBP11.25□□□□□ -0.61
SS18-221ENST00000582448 SARSP49591 514 aaKnown RBP11.25□□□□□ -0.61
SS18-221ENST00000582448 MRPS6P82932 125 aaKnown RBP11.25□□□□□ -0.61
SS18-221ENST00000582448 RBM10P98175 930 aaKnown RBP11.25□□□□□ -0.61
SS18-221ENST00000582448 GSTM4Q03013 218 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 IQCB1Q15051 598 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 XRRA1Q6P2D8 792 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 PLA2G4DQ86XP0 818 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 NPAS4Q8IUM7 802 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 DRC7Q8IY82 874 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 GRAMD1CQ8IYS0 662 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 CMTR2Q8IYT2 770 aaKnown RBP11.25□□□□□ -0.61
SS18-221ENST00000582448 FBXL6Q8N531 539 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 GIMAP8Q8ND71 665 aaPredicted RBP11.25□□□□□ -0.61
SS18-221ENST00000582448 SPATA20Q8TB22 786 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 EPS8L3Q8TE67 593 aaKnown RBP11.25□□□□□ -0.61
SS18-221ENST00000582448 CRYGNQ8WXF5 182 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 LINC01599Q8WXQ3 324 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 ATOH1Q92858 354 aaPredicted RBP11.25□□□□□ -0.61
SS18-221ENST00000582448 P2RX5Q93086 422 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 PLIN2Q99541 437 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 PRRX2Q99811 253 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 SENP7Q9BQF6 1050 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 APOL5Q9BWW9 433 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 NRSN2Q9GZP1 204 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 ERAP1Q9NZ08 941 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 RAXQ9Y2V3 346 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 NLRC5Q86WI3 1866 aa11.25□□□□□ -0.61
SS18-221ENST00000582448 GSTTP1A0A1W2PQM5 241 aa11.24□□□□□ -0.61
SS18-221ENST00000582448 GLP2RO95838 553 aa11.24□□□□□ -0.61
SS18-221ENST00000582448 RPN1P04843 607 aaKnown RBP11.24□□□□□ -0.61
SS18-221ENST00000582448 TPM3P06753 285 aa11.24□□□□□ -0.61
SS18-221ENST00000582448 ERCC5P28715 1186 aaPredicted RBP11.24□□□□□ -0.61
SS18-221ENST00000582448 PPP1R2P41236 205 aa11.24□□□□□ -0.61
SS18-221ENST00000582448 PREPP48147 710 aa11.24□□□□□ -0.61
SS18-221ENST00000582448 VCPP55072 806 aaKnown RBP11.24□□□□□ -0.61
SS18-221ENST00000582448 COASYQ13057 564 aa11.24□□□□□ -0.61
SS18-221ENST00000582448 PAK2Q13177 524 aa11.24□□□□□ -0.61
SS18-221ENST00000582448 CEP55Q53EZ4 464 aa11.24□□□□□ -0.61
SS18-221ENST00000582448 HS1BP3Q53T59 392 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms