RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ACTR2P61160 394 aa9.3□□□□□ -0.92
DNMT1-219ENST00000589349 WDR5P61964 334 aaKnown RBP9.3□□□□□ -0.92
DNMT1-219ENST00000589349 FAM160B1Q5W0V3 765 aa9.3□□□□□ -0.92
DNMT1-219ENST00000589349 LETMD1Q6P1Q0 360 aa9.3□□□□□ -0.92
DNMT1-219ENST00000589349 SERINC5Q86VE9 423 aa9.3□□□□□ -0.92
DNMT1-219ENST00000589349 FBXO27Q8NI29 283 aa9.3□□□□□ -0.92
DNMT1-219ENST00000589349 LMBR1Q8WVP7 490 aa9.3□□□□□ -0.92
DNMT1-219ENST00000589349 ACSF2Q96CM8 615 aaPredicted RBP9.3□□□□□ -0.92
DNMT1-219ENST00000589349 MISP3Q96FF7 219 aa9.3□□□□□ -0.92
DNMT1-219ENST00000589349 AGO4Q9HCK5 861 aaKnown RBP9.3□□□□□ -0.92
DNMT1-219ENST00000589349 TPX2Q9ULW0 747 aaKnown RBP9.3□□□□□ -0.92
DNMT1-219ENST00000589349 CORINQ9Y5Q5 1042 aa9.3□□□□□ -0.92
DNMT1-219ENST00000589349 SZT2Q5T011 3432 aa9.3□□□□□ -0.92
DNMT1-219ENST00000589349 LAMA3Q16787 3333 aa9.3□□□□□ -0.92
DNMT1-219ENST00000589349 ABHD14A-ACY1A0A1B0GW23 586 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 CHMP2AO43633 222 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 EIF5BO60841 1220 aaKnown RBP9.29□□□□□ -0.92
DNMT1-219ENST00000589349 EFCAB14O75071 495 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 CDKL5O76039 1030 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 EOMESO95936 686 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 CEACAM5P06731 702 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 XBP1P17861 261 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 SREBF1P36956 1147 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 DEFB103AP81534 67 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 TMEM62Q0P6H9 643 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 IFI16Q16666 785 aaKnown RBP9.29□□□□□ -0.92
DNMT1-219ENST00000589349 ERICH6BQ5W0A0 696 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 MCTP2Q6DN12 878 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 MIS18BP1Q6P0N0 1132 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 FAM214BQ7L5A3 538 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 FAM13CQ8NE31 585 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 DBF4BQ8NFT6 615 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 PHOSPHO2Q8TCD6 241 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 DNAJB3Q8WWF6 145 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 CTAGE1Q96RT6 745 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 YME1L1Q96TA2 773 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 SPON2Q9BUD6 331 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 RNF26Q9BY78 433 aaPredicted RBP9.29□□□□□ -0.92
DNMT1-219ENST00000589349 TUBE1Q9UJT0 475 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 POLR3KQ9Y2Y1 108 aaPredicted RBP9.29□□□□□ -0.92
DNMT1-219ENST00000589349 SCN10AQ9Y5Y9 1956 aa9.29□□□□□ -0.92
DNMT1-219ENST00000589349 RRN3P2A6NIE6 340 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 IPO5O00410 1097 aaKnown RBP9.28□□□□□ -0.92
DNMT1-219ENST00000589349 DTNBO60941 627 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 HTR3BO95264 441 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 GHRP10912 638 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 INSRRP14616 1297 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 IFNAR1P17181 557 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 OXCT1P55809 520 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 TOB2Q14106 344 aaPredicted RBP9.28□□□□□ -0.92
DNMT1-219ENST00000589349 PKN1Q16512 942 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 SWSAP1Q6NVH7 229 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 TAF2Q6P1X5 1199 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.28□□□□□ -0.92
DNMT1-219ENST00000589349 RUFY4Q6ZNE9 571 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 METTL13Q8N6R0 699 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 TRAPPC12Q8WVT3 735 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 ZBTB10Q96DT7 871 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 COX4I2Q96KJ9 171 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 HEXIM2Q96MH2 286 aaKnown RBP9.28□□□□□ -0.92
DNMT1-219ENST00000589349 PPP1R16BQ96T49 567 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 DPH2Q9BQC3 489 aaPredicted RBP9.28□□□□□ -0.92
DNMT1-219ENST00000589349 NT5C1AQ9BXI3 368 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 IFIH1Q9BYX4 1025 aaKnown RBP9.28□□□□□ -0.92
DNMT1-219ENST00000589349 ZMYND12Q9H0C1 365 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 ZNF302Q9NR11 478 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 KIAA1522Q9P206 1035 aaPredicted RBP9.28□□□□□ -0.92
DNMT1-219ENST00000589349 REV1Q9UBZ9 1251 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 CCDC39Q9UFE4 941 aa9.28□□□□□ -0.92
DNMT1-219ENST00000589349 TRIP12Q14669 1992 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-219ENST00000589349 FAM86B1E9PN63 330 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 MEIS1O00470 390 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 GAS7O60861 476 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 CSPG5O95196 566 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 DEXIO95424 95 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 FAM86B2P0C5J1 330 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 SETQ01105 290 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-219ENST00000589349 ITGB3BPQ13352 177 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-219ENST00000589349 ANKRD1Q15327 319 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 TRIM71Q2Q1W2 868 aaKnown RBP9.27□□□□□ -0.93
DNMT1-219ENST00000589349 XP32Q5T750 250 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 EP400NLQ6ZTU2 488 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 PLD6Q8N2A8 252 aaKnown RBP9.27□□□□□ -0.93
DNMT1-219ENST00000589349 ZNF274Q96GC6 653 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-219ENST00000589349 FBXL18Q96ME1 805 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 SCLT1Q96NL6 688 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 RAD9AQ99638 391 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 TM6SF1Q9BZW5 370 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 TBC1D22BQ9NU19 505 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 CDY2AQ9Y6F7 541 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 SCN5AQ14524 2016 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 NFASCO94856 1347 aa9.27□□□□□ -0.93
DNMT1-219ENST00000589349 CCDC194A0A1B0GVG4 234 aa9.26□□□□□ -0.93
DNMT1-219ENST00000589349 ESYT2A0FGR8 921 aa9.26□□□□□ -0.93
DNMT1-219ENST00000589349 LCHNA4D1U4 455 aa9.26□□□□□ -0.93
DNMT1-219ENST00000589349 ADAMTS3O15072 1205 aa9.26□□□□□ -0.93
DNMT1-219ENST00000589349 EPB41L2O43491 1005 aaKnown RBP9.26□□□□□ -0.93
DNMT1-219ENST00000589349 CAND2O75155 1236 aa9.26□□□□□ -0.93
DNMT1-219ENST00000589349 CHRNA1P02708 482 aa9.26□□□□□ -0.93
DNMT1-219ENST00000589349 CXCL10P02778 98 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms