RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 KRBA2Q6ZNG9 492 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 SMRP1Q8NCR6 262 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 SCFD1Q8WVM8 642 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 DDX27Q96GQ7 796 aaKnown RBP19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 EMILIN2Q9BXX0 1053 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 PCIF1Q9H4Z3 704 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 TMEM206Q9H813 350 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 ANK1P16157 1881 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 VWA8A3KMH1 1905 aa19.9■□□□□ 0.78
SNRPA1-203ENST00000540017 FSD2A1L4K1 749 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 GOLGA8IPA6NC78 632 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 GOLGA8JA6NMD2 632 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 TGFB1I1O43294 461 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 NFICP08651 508 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 RPL17P18621 184 aaKnown RBP19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 GARTP22102 1010 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 KLRC2P26717 231 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 RPL9P32969 192 aaKnown RBP19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 CLCN4P51793 760 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 KMT5BQ4FZB7 885 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 STXBP4Q6ZWJ1 553 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 CEP57Q86XR8 500 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 NELFCDQ8IXH7 590 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 TMEM87AQ8NBN3 555 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 FEZF2Q8TBJ5 459 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 FAM213AQ9BRX8 229 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 TTPALQ9BTX7 342 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 APOL5Q9BWW9 433 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 S1PR5Q9H228 398 aa19.89■□□□□ 0.77
SNRPA1-203ENST00000540017 FGFR3P22607 806 aa19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 TKTP29401 623 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 ANP32AP39687 249 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 STK4Q13043 487 aa19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 SMAD4Q13485 552 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 PUS10Q3MIT2 529 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 KANK3Q6NY19 840 aa19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 GLYCTKQ8IVS8 523 aa19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 GPR65Q8IYL9 337 aa19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 FMR1NBQ8N0W7 255 aaPredicted RBP19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 KIAA0895Q8NCT3 520 aa19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 LNX1Q8TBB1 728 aaPredicted RBP19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 CASP10Q92851 521 aa19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 UHRF1Q96T88 793 aaPredicted RBP19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 CDH22Q9UJ99 828 aa19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 UBQLN1Q9UMX0 589 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 SSX2IPQ9Y2D8 614 aa19.88■□□□□ 0.77
SNRPA1-203ENST00000540017 MUC3AQ02505 3323 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 PPEF2O14830 753 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 RPN1P04843 607 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 CYP3A5P20815 502 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 LRPAP1P30533 357 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 DPYDQ12882 1025 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 ELAVL2Q12926 359 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 SNW1Q13573 536 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 SPATA1Q5VX52 437 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 ARMCX5Q6P1M9 558 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 CD302Q8IX05 232 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 C12orf76Q8N812 135 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 ENGASEQ8NFI3 743 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 PIK3R5Q8WYR1 880 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 ASB7Q9H672 318 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 EXOC1Q9NV70 894 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 FNIP2Q9P278 1114 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 USP15Q9Y4E8 981 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 PLXNA3P51805 1871 aa19.87■□□□□ 0.77
SNRPA1-203ENST00000540017 ADAM12O43184 909 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 EXTL3O43909 919 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 MYL1P05976 194 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 SRGAP2BP0DMP2 458 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 POU5F1Q01860 360 aaKnown RBP19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 TMEM132DQ14C87 1099 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 SMAD2Q15796 467 aaKnown RBP19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 PSMD5Q16401 504 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 BMT2Q1RMZ1 405 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 PPFIBP1Q86W92 1011 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 EFCAB13Q8IY85 973 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 FAM84AQ96KN4 292 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 TSPAN18Q96SJ8 248 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 CLSTN3Q9BQT9 956 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 CD320Q9NPF0 282 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 AGPAT3Q9NRZ7 376 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 CHMP5Q9NZZ3 219 aa19.86■□□□□ 0.77
SNRPA1-203ENST00000540017 UBE4BO95155 1302 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 GOLGA6L4A6NEF3 574 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 CLIC2O15247 247 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 LDHAP00338 332 aaKnown RBP19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 ADH1AP07327 375 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 SPATA31D3P0C874 917 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 RSPO2Q6UXX9 243 aaPredicted RBP19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 SPATA31D4Q6ZUB0 917 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 PALB2Q86YC2 1186 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 BRSK2Q8IWQ3 736 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 NOC3LQ8WTT2 800 aaKnown RBP19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 SUSD6Q92537 303 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 FBXL18Q96ME1 805 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 DERAQ9Y315 318 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 NUB1Q9Y5A7 615 aa19.85■□□□□ 0.77
SNRPA1-203ENST00000540017 TRAPPC3O43617 180 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms