RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 RRP12Q5JTH9 1297 aaKnown RBP3.78□□□□□ -1.8
XRN1-211ENST00000477237 ZNF572Q7Z3I7 529 aaPredicted RBP3.78□□□□□ -1.8
XRN1-211ENST00000477237 TRMT2AQ8IZ69 625 aaKnown RBP3.78□□□□□ -1.8
XRN1-211ENST00000477237 FBXO18Q8NFZ0 1043 aa3.78□□□□□ -1.8
XRN1-211ENST00000477237 FBXL20Q96IG2 436 aa3.78□□□□□ -1.8
XRN1-211ENST00000477237 NELL2Q99435 816 aa3.78□□□□□ -1.8
XRN1-211ENST00000477237 MRI1Q9BV20 369 aa3.78□□□□□ -1.8
XRN1-211ENST00000477237 QTRT1Q9BXR0 403 aaKnown RBP3.78□□□□□ -1.8
XRN1-211ENST00000477237 MS4A5Q9H3V2 200 aa3.78□□□□□ -1.8
XRN1-211ENST00000477237 EBF3Q9H4W6 596 aa3.78□□□□□ -1.8
XRN1-211ENST00000477237 HSFX1Q9UBD0 423 aa3.78□□□□□ -1.8
XRN1-211ENST00000477237 PPP2R3BQ9Y5P8 575 aa3.78□□□□□ -1.8
XRN1-211ENST00000477237 LINC00473A8K010 186 aa3.77□□□□□ -1.81
XRN1-211ENST00000477237 ZNF891A8MT65 544 aaPredicted RBP3.77□□□□□ -1.81
XRN1-211ENST00000477237 ADM5C9JUS6 153 aa3.77□□□□□ -1.81
XRN1-211ENST00000477237 SRGNP10124 158 aa3.77□□□□□ -1.81
XRN1-211ENST00000477237 UBXN2BQ14CS0 331 aa3.77□□□□□ -1.81
XRN1-211ENST00000477237 SUPT20HL1Q3ZLR7 823 aa3.77□□□□□ -1.81
XRN1-211ENST00000477237 GPR158Q5T848 1215 aa3.77□□□□□ -1.81
XRN1-211ENST00000477237 TSHZ1Q6ZSZ6 1077 aa3.77□□□□□ -1.81
XRN1-211ENST00000477237 RASAL3Q86YV0 1011 aa3.77□□□□□ -1.81
XRN1-211ENST00000477237 MARS2Q96GW9 593 aaKnown RBP3.77□□□□□ -1.81
XRN1-211ENST00000477237 SH2D3AQ9BRG2 576 aa3.77□□□□□ -1.81
XRN1-211ENST00000477237 PADI4Q9UM07 663 aa3.77□□□□□ -1.81
XRN1-211ENST00000477237 PROM1O43490 865 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 TGM5O43548 720 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 POMCP01189 267 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 CD1AP06126 327 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 KPNA1P52294 538 aaPredicted RBP3.76□□□□□ -1.81
XRN1-211ENST00000477237 LINC00205P59089 165 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 RBL2Q08999 1139 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 LAMB3Q13751 1172 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 NBPF8Q3BBV2 869 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 SLC44A4Q53GD3 710 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 SLC2A7Q6PXP3 512 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 MEPCEQ7L2J0 689 aaKnown RBP3.76□□□□□ -1.81
XRN1-211ENST00000477237 EFHBQ8N7U6 833 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 Q8NA96 180 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 OR14C36Q8NHC7 312 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 MKL1Q969V6 931 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 HMCESQ96FZ2 354 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 GPR101Q96P66 508 aaPredicted RBP3.76□□□□□ -1.81
XRN1-211ENST00000477237 HAPLN3Q96S86 360 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 NOTCH4Q99466 2003 aa3.76□□□□□ -1.81
XRN1-211ENST00000477237 F2P00734 622 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 CKBP12277 381 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 SFPQP23246 707 aaKnown RBP eCLIP3.75□□□□□ -1.81
XRN1-211ENST00000477237 SART3Q15020 963 aaKnown RBP3.75□□□□□ -1.81
XRN1-211ENST00000477237 C21orf62-AS1Q17RA5 79 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 MST1LQ2TV78 715 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 AFMIDQ63HM1 303 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 SUMO4Q6EEV6 95 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 KIAA1161Q6NSJ0 714 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 SLC18B1Q6NT16 456 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 USP43Q70EL4 1123 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 CASKIN2Q8WXE0 1202 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 RSAD2Q8WXG1 361 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 LPIN2Q92539 896 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 VPS33BQ9H267 617 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 FBXO34Q9NWN3 711 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 FAM30AQ9NZY2 134 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 SERGEFQ9UGK8 458 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 KCNG1Q9UIX4 513 aa3.75□□□□□ -1.81
XRN1-211ENST00000477237 CCDC9Q9Y3X0 531 aaKnown RBP3.75□□□□□ -1.81
XRN1-211ENST00000477237 RPTORQ8N122 1335 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 RAB11FIP3O75154 756 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 ASMTLO95671 621 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 LPLP06858 475 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 CERS1P27544 350 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 LSP1P33241 339 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 MANFP55145 182 aaKnown RBP3.74□□□□□ -1.81
XRN1-211ENST00000477237 PABPC4Q13310 644 aaKnown RBP eCLIP3.74□□□□□ -1.81
XRN1-211ENST00000477237 SQSTM1Q13501 440 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 PTPRRQ15256 657 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 TXNRD1Q16881 649 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 CNNM4Q6P4Q7 775 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 NPM2Q86SE8 214 aaKnown RBP3.74□□□□□ -1.81
XRN1-211ENST00000477237 SLC30A5Q8TAD4 765 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 EDARQ9UNE0 448 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 CDY2AQ9Y6F7 541 aa3.74□□□□□ -1.81
XRN1-211ENST00000477237 PPP6CO00743 305 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 CHRM2P08172 466 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 RAP2AP10114 183 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 ATP5JP18859 108 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 ADSLP30566 484 aaPredicted RBP3.73□□□□□ -1.81
XRN1-211ENST00000477237 NOMO3P69849 1222 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 SP140Q13342 867 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 NOMO1Q15155 1222 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 FAM153CQ494X1 144 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 NOMO2Q5JPE7 1267 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 CEP78Q5JTW2 689 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 SOGA3Q5TF21 947 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 TOR1AIP2Q8NFQ8 470 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 IGSF5Q9NSI5 407 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 SPTLC3Q9NUV7 552 aa3.73□□□□□ -1.81
XRN1-211ENST00000477237 MAGEC2Q9UBF1 373 aaPredicted RBP3.73□□□□□ -1.81
XRN1-211ENST00000477237 CYP2D6P10635 497 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 GATA3P23771 443 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 SCNN1BP51168 640 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 LGALS4P56470 323 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms