RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 MGAMO43451 1857 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 ANK1P16157 1881 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 CCDC151A5D8V7 595 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 RRN3P2A6NIE6 340 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 MCF2P10911 925 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 ARF4P18085 180 aaPredicted RBP18.19■□□□□ 0.5
DDX41-201ENST00000330503 CRHR2Q13324 411 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 ACAD10Q6JQN1 1059 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 TLK2Q86UE8 772 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 RHOT2Q8IXI1 618 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 NLRP7Q8WX94 980 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 TAF4BQ92750 862 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 HES6Q96HZ4 224 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
DDX41-201ENST00000330503 CHORDC1Q9UHD1 332 aaPredicted RBP18.19■□□□□ 0.5
DDX41-201ENST00000330503 PCDHB4Q9Y5E5 795 aa18.19■□□□□ 0.5
DDX41-201ENST00000330503 KAT6AQ92794 2004 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 KCNK3O14649 394 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 ZEB2O60315 1214 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 F2P00734 622 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 CYP1A2P05177 515 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 STAG3L1P0CL83 205 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 SMIM10L2AP0DMW4 78 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 SMIM10L2BP0DMW5 78 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 CXCL8P10145 99 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 TBXAS1P24557 533 aaPredicted RBP18.18■□□□□ 0.5
DDX41-201ENST00000330503 RGS2P41220 211 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 BPIFB4P59827 614 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 TFAMQ00059 246 aaKnown RBP18.18■□□□□ 0.5
DDX41-201ENST00000330503 HIC1Q14526 733 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 PBKQ96KB5 322 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 ADAMTS10Q9H324 1103 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 RPF1Q9H9Y2 349 aaKnown RBP18.18■□□□□ 0.5
DDX41-201ENST00000330503 FAM53CQ9NYF3 392 aa18.18■□□□□ 0.5
DDX41-201ENST00000330503 LACTBL1A8MY62 500 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 WDR93Q6P2C0 686 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 ZNF677Q86XU0 584 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 HNRNPLLQ8WVV9 542 aaKnown RBP18.17■□□□□ 0.5
DDX41-201ENST00000330503 RBM12Q9NTZ6 932 aaKnown RBP18.17■□□□□ 0.5
DDX41-201ENST00000330503 AMFRQ9UKV5 643 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 TARSL2A2RTX5 802 aaKnown RBP18.17■□□□□ 0.5
DDX41-201ENST00000330503 ATMINO43313 823 aaPredicted RBP18.17■□□□□ 0.5
DDX41-201ENST00000330503 TSPAN1O60635 241 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 MTA2O94776 668 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 IL18RAPO95256 599 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 CFHP08603 1231 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 UNGP13051 313 aaPredicted RBP18.17■□□□□ 0.5
DDX41-201ENST00000330503 SGSM1Q2NKQ1 1148 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 TMEM270Q6UE05 265 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 TMEM130Q8N3G9 435 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 XYLT2Q9H1B5 865 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 CTTNBP2NLQ9P2B4 639 aa18.17■□□□□ 0.5
DDX41-201ENST00000330503 DDX3YO15523 660 aaKnown RBP18.16■□□□□ 0.5
DDX41-201ENST00000330503 TM4SF4P48230 202 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 ZNF132P52740 706 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 RNASE9P60153 205 aaKnown RBP18.16■□□□□ 0.5
DDX41-201ENST00000330503 ZNF410Q86VK4 478 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 RBBP8NLQ8NC74 664 aaPredicted RBP18.16■□□□□ 0.5
DDX41-201ENST00000330503 APBA2Q99767 749 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 LRRC1Q9BTT6 524 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 CDHR5Q9HBB8 845 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 ARFGAP3Q9NP61 516 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 SPDYE4A6NLX3 237 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 HAS3O00219 553 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 TNPO2O14787 897 aaKnown RBP18.16■□□□□ 0.5
DDX41-201ENST00000330503 GPR32O75388 356 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 TUBBP07437 444 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 FGFR4P22455 802 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 MFSD10Q14728 455 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 KIZQ2M2Z5 673 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 BEND6Q5SZJ8 279 aaPredicted RBP18.16■□□□□ 0.5
DDX41-201ENST00000330503 HDAC7Q8WUI4 952 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 CCDC102AQ96A19 550 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 CALR3Q96L12 384 aaKnown RBP18.16■□□□□ 0.5
DDX41-201ENST00000330503 ALG6Q9Y672 507 aa18.16■□□□□ 0.5
DDX41-201ENST00000330503 NRCAMQ92823 1304 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 A0A1B0GUA9 196 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 MBLAC1A4D2B0 266 aaPredicted RBP18.15■□□□□ 0.5
DDX41-201ENST00000330503 TBC1D8O95759 1140 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 TNNC2P02585 160 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 CYP1A1P04798 512 aaPredicted RBP18.15■□□□□ 0.5
DDX41-201ENST00000330503 TMEM191BP0C7N4 346 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 PSEN2P49810 448 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 ADAM17P78536 824 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 BEX3Q00994 111 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 TRPC3Q13507 836 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 LONRF2Q1L5Z9 754 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 SLC10A6Q3KNW5 377 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 RUFY4Q6ZNE9 571 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 USP38Q8NB14 1042 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 ANKRD36BP1Q96IX9 119 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 IMPG2Q9BZV3 1241 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 FAM49AQ9H0Q0 323 aaPredicted RBP18.15■□□□□ 0.5
DDX41-201ENST00000330503 SIX4Q9UIU6 781 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 TMEM59LQ9UK28 342 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 GTF3C4Q9UKN8 822 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 Q9Y3F1 56 aa18.15■□□□□ 0.5
DDX41-201ENST00000330503 CEP104O60308 925 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 NFICP08651 508 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 MRPS25P82663 173 aaKnown RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms