RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 DCAF4L1Q3SXM0 396 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 C10orf76Q5T2E6 689 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 KIAA0319LQ8IZA0 1049 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 TMEM199Q8N511 208 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 BAP1Q92560 729 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 C16orf45Q96MC5 204 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 CGRRF1Q99675 332 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 RPF1Q9H9Y2 349 aaKnown RBP18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 C1orf112Q9NSG2 853 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 DNAJC12Q9UKB3 198 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 ADGRG1Q9Y653 693 aa18.12■□□□□ 0.49
TRAPPC3-210ENST00000617904 LRRIQ3A6PVS8 624 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 KRT86O43790 486 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 GFPT2O94808 682 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 NOL4O94818 638 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 CLSTN1O94985 981 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 ACRP10323 421 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 FOSL2P15408 326 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 CYP2C18P33260 490 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 CBWD6Q4V339 395 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 EPC2Q52LR7 807 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 CBWD3Q5JTY5 395 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 CBWD5Q5RIA9 395 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 MARCH8Q5T0T0 291 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 ZBTB33Q86T24 672 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 WDR49Q8IV35 697 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 BRSK2Q8IWQ3 736 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 CD302Q8IX05 232 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 KIF18AQ8NI77 898 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 KAT2BQ92831 832 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 TMEM117Q9H0C3 514 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 FAM49AQ9H0Q0 323 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 HAUS4Q9H6D7 363 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 RAB20Q9NX57 234 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 USP20Q9Y2K6 914 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 COQ4Q9Y3A0 265 aa18.11■□□□□ 0.49
TRAPPC3-210ENST00000617904 TNNC2P02585 160 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 CLTAP09496 248 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 PIK3CAP42336 1068 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 ACOT2P49753 483 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 DLG4P78352 724 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 CLDN10P78369 228 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 PPP3CAQ08209 521 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 ITGA7Q13683 1181 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 RAD9BQ6WBX8 426 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 ZNF365Q70YC5 407 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 CATSPER4Q7RTX7 472 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 C17orf53Q8N3J3 647 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 ANKRD36BP1Q96IX9 119 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 CCDC94Q9BW85 323 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 IFT122Q9HBG6 1241 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 MYO1AQ9UBC5 1043 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 CDH23Q9H251 3354 aa18.1■□□□□ 0.49
TRAPPC3-210ENST00000617904 GRXCR1A8MXD5 290 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 RNF225M0QZC1 329 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 EPHB6O15197 1021 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 TMEM191BP0C7N4 346 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 ACTN1P12814 892 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 SOX5P35711 763 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 PTPN11Q06124 597 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 KIF5AQ12840 1032 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 DUOXA2Q1HG44 320 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 FAM47CQ5HY64 1035 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 PSRC1Q6PGN9 363 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 WDR59Q6PJI9 974 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 TOGARAM2Q6ZUX3 1019 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 TIFAQ96CG3 184 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 ZBTB45Q96K62 511 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 CHP1Q99653 195 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 ZNF576Q9H609 170 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 UBE2TQ9NPD8 197 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 HDAC6Q9UBN7 1215 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 FHOD1Q9Y613 1164 aa18.09■□□□□ 0.49
TRAPPC3-210ENST00000617904 UMODL1Q5DID0 1318 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 PROZP22891 400 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 EIF4A3P38919 411 aaKnown RBP18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 PBX2P40425 430 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 PRKCIP41743 596 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 KIF11P52732 1056 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 CRYBB1P53674 252 aaPredicted RBP18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 YARSP54577 528 aaKnown RBP18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 TRPC3Q13507 836 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 IQCEQ6IPM2 695 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 NOTUMQ6P988 496 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 ZNF662Q6ZS27 426 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 SV2AQ7L0J3 742 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 NT5DC4Q86YG4 428 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 JAKMIP2Q96AA8 810 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 FAM212AQ96EL1 285 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 SEZ6LQ9BYH1 1024 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 PBX4Q9BYU1 374 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 IL23AQ9NPF7 189 aa18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 CPSF3Q9UKF6 684 aaKnown RBP18.08■□□□□ 0.49
TRAPPC3-210ENST00000617904 B4GALT4O60513 344 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 TBXAS1P24557 533 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 BPIFB4P59827 614 aa18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 DRAP1Q14919 205 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-210ENST00000617904 KIZQ2M2Z5 673 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms