RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 FAM114A1Q8IWE2 563 aa16.9■□□□□ 0.3
CTTN-215ENST00000533931 ZSWIM2Q8NEG5 633 aa16.9■□□□□ 0.3
CTTN-215ENST00000533931 CACTINQ8WUQ7 758 aaKnown RBP16.9■□□□□ 0.3
CTTN-215ENST00000533931 DDX27Q96GQ7 796 aaKnown RBP16.9■□□□□ 0.3
CTTN-215ENST00000533931 BORCS6Q96GS4 357 aa16.9■□□□□ 0.3
CTTN-215ENST00000533931 CGRRF1Q99675 332 aa16.9■□□□□ 0.3
CTTN-215ENST00000533931 STK39Q9UEW8 545 aa16.9■□□□□ 0.3
CTTN-215ENST00000533931 STX10O60499 249 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 POMCP01189 267 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 LINC00271P0C7V0 271 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 LRPAP1P30533 357 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 RPL9P32969 192 aaKnown RBP16.89■□□□□ 0.29
CTTN-215ENST00000533931 PPM1AP35813 382 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 AFF1P51825 1210 aaKnown RBP16.89■□□□□ 0.29
CTTN-215ENST00000533931 STX17P56962 302 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 BFSP1Q12934 665 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 ANO6Q4KMQ2 910 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 C11orf57Q6ZUT1 292 aaPredicted RBP16.89■□□□□ 0.29
CTTN-215ENST00000533931 COLGALT2Q8IYK4 626 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 BEST2Q8NFU1 509 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 PARD3BQ8TEW8 1205 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 KIF12Q96FN5 646 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 ZMAT2Q96NC0 199 aaKnown RBP16.89■□□□□ 0.29
CTTN-215ENST00000533931 FAM193BQ96PV7 902 aaPredicted RBP16.89■□□□□ 0.29
CTTN-215ENST00000533931 FNBP1Q96RU3 617 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 PLVAPQ9BX97 442 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 DNAJC25Q9H1X3 360 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 CWH43Q9H720 699 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 MIOSQ9NXC5 875 aa16.89■□□□□ 0.29
CTTN-215ENST00000533931 ARMCX3Q9UH62 379 aaPredicted RBP16.89■□□□□ 0.29
CTTN-215ENST00000533931 MRPL42Q9Y6G3 142 aaKnown RBP16.89■□□□□ 0.29
CTTN-215ENST00000533931 LINC01553A4QN01 128 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 GRXCR1A8MXD5 290 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 RB1P06400 928 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 CA3P07451 260 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 DNAJB2P25686 324 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 GTF2H1P32780 548 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 VAMP7P51809 220 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 RABGGTBP53611 331 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 TPD52L1Q16890 204 aaPredicted RBP16.88■□□□□ 0.29
CTTN-215ENST00000533931 DUOXA2Q1HG44 320 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 PAN2Q504Q3 1202 aaKnown RBP16.88■□□□□ 0.29
CTTN-215ENST00000533931 JADE1Q6IE81 842 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 LRSAM1Q6UWE0 723 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 RDH13Q8NBN7 331 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 SRRTQ9BXP5 876 aaKnown RBP16.88■□□□□ 0.29
CTTN-215ENST00000533931 NRDE2Q9H7Z3 1164 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 PDE11AQ9HCR9 933 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 INTS13Q9NVM9 706 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 PLAGL2Q9UPG8 496 aa16.88■□□□□ 0.29
CTTN-215ENST00000533931 YBX2Q9Y2T7 364 aaKnown RBP16.88■□□□□ 0.29
CTTN-215ENST00000533931 FNDC1Q4ZHG4 1894 aaPredicted RBP16.88■□□□□ 0.29
CTTN-215ENST00000533931 LCHNA4D1U4 455 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 SMTNL1A8MU46 457 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 C5orf67F2Z3F1 127 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 TMEM189-UBE2V1I3L0A0 370 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 NFICP08651 508 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 EEF1GP26641 437 aaKnown RBP16.87■□□□□ 0.29
CTTN-215ENST00000533931 ZNF165P49910 485 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 ERVK-21P61565 698 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 GLRA4Q5JXX5 417 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 ZNF280BQ86YH2 543 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 EFCAB13Q8IY85 973 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 FAM212AQ96EL1 285 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 ANKRD36BP1Q96IX9 119 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 ZNF558Q96NG5 402 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 TGS1Q96RS0 853 aaKnown RBP16.87■□□□□ 0.29
CTTN-215ENST00000533931 GZF1Q9H116 711 aaPredicted RBP16.87■□□□□ 0.29
CTTN-215ENST00000533931 ITGA11Q9UKX5 1188 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 NFE2L3Q9Y4A8 694 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 PCDHB12Q9Y5F1 795 aa16.87■□□□□ 0.29
CTTN-215ENST00000533931 LRRIQ3A6PVS8 624 aaPredicted RBP16.86■□□□□ 0.29
CTTN-215ENST00000533931 DDHD2O94830 711 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 TNNC2P02585 160 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 ALDH2P05091 517 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 TMEM191BP0C7N4 346 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 ALDH7A1P49419 539 aaKnown RBP16.86■□□□□ 0.29
CTTN-215ENST00000533931 WNT7BP56706 349 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 BCAR1P56945 870 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 TAP1Q03518 808 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 SPAG1Q07617 926 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 CCDC40Q4G0X9 1142 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 CDKAL1Q5VV42 579 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 GPR153Q6NV75 609 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 KCNT2Q6UVM3 1135 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 TRIM59Q8IWR1 403 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 CCDC127Q96BQ5 260 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 TIFAQ96CG3 184 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 CXCL16Q9H2A7 254 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 SLC28A3Q9HAS3 691 aa16.86■□□□□ 0.29
CTTN-215ENST00000533931 ANO9A1A5B4 782 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 PMM2O15305 246 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 ZC3H11AO75152 810 aaKnown RBP eCLIP16.85■□□□□ 0.29
CTTN-215ENST00000533931 GALTP07902 379 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 DLATP10515 647 aaKnown RBP16.85■□□□□ 0.29
CTTN-215ENST00000533931 TNNI1P19237 187 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 BMPR1AP36894 532 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 PBX2P40425 430 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 PNPLA4P41247 253 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 TFAMQ00059 246 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms